RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SH3PXD2AQ5TCZ1 1133 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 PIK3R6Q5UE93 754 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 SPECC1LQ69YQ0 1117 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 GRAMD4Q6IC98 578 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 WDR59Q6PJI9 974 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 TSSK4Q6SA08 328 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 MCOLN2Q8IZK6 566 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 EMC1Q8N766 993 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 TERB1Q8NA31 727 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 MSANTD4Q8NCY6 345 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 WFDC5Q8TCV5 224 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 USP33Q8TEY7 942 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 NELL1Q92832 810 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 LMLNQ96KR4 655 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 CFAP57Q96MR6 1250 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 TBCBQ99426 244 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 IER2Q9BTL4 223 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 NUCKS1Q9H1E3 243 aaKnown RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 FAM204AQ9H8W3 233 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 METTL5Q9NRN9 209 aaKnown RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 SEPT11Q9NVA2 429 aaKnown RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 DNAJC17Q9NVM6 304 aaKnown RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.87□□□□□ -0.99
UBR1-204ENST00000563239 DDIT4Q9NX09 232 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 NENFQ9UMX5 172 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 LUC7L2Q9Y383 392 aaKnown RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 USP34Q70CQ2 3546 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 SYNJ2BP-COX16A0A087WUM0 186 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 SIGLEC16A6NMB1 481 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 TMCO5BA8MYB1 307 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 LAMTOR5O43504 91 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 ADAM23O75077 832 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 ADCY5O95622 1261 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 MOCS2O96007 188 aaPredicted RBP8.86□□□□□ -0.99
UBR1-204ENST00000563239 APODP05090 189 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 CALB1P05937 261 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 GZMAP12544 262 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 HNRNPLP14866 589 aaKnown RBP eCLIP8.86□□□□□ -0.99
UBR1-204ENST00000563239 RRM1P23921 792 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 CCR1P32246 355 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 GBP1P32455 592 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 DGKGP49619 791 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 SULT1E1P49888 294 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 IRAK1P51617 712 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 PTPN5P54829 565 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 SEC13P55735 322 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 RPS24P62847 133 aaKnown RBP8.86□□□□□ -0.99
UBR1-204ENST00000563239 CSTF1Q05048 431 aaKnown RBP8.86□□□□□ -0.99
UBR1-204ENST00000563239 DMWDQ09019 674 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 NME3Q13232 169 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 GSE1Q14687 1217 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 PPP2R5DQ14738 602 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 GEN1Q17RS7 908 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 MS4A13Q5J8X5 152 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 RAP1GAP2Q684P5 730 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 TMEM215Q68D42 235 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 KIAA0907Q7Z7F0 614 aaPredicted RBP8.86□□□□□ -0.99
UBR1-204ENST00000563239 C14orf80Q86SX3 495 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 ZNF683Q8IZ20 524 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 IL17RCQ8NAC3 791 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 C3orf20Q8ND61 904 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 RPLP0P6Q8NHW5 317 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 DDI1Q8WTU0 396 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 RXFP2Q8WXD0 754 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 CENPIQ92674 756 aaPredicted RBP8.86□□□□□ -0.99
UBR1-204ENST00000563239 EXOC4Q96A65 974 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 IQCDQ96DY2 449 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 TMA16Q96EY4 203 aaKnown RBP8.86□□□□□ -0.99
UBR1-204ENST00000563239 BTN2A3PQ96KV6 586 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 XPO6Q96QU8 1125 aaKnown RBP8.86□□□□□ -0.99
UBR1-204ENST00000563239 PHOX2BQ99453 314 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 DNAJC7Q99615 494 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 IRX2Q9BZI1 471 aaPredicted RBP8.86□□□□□ -0.99
UBR1-204ENST00000563239 ZDHHC4Q9NPG8 344 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 TMPRSS4Q9NRS4 437 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 FAM86C1Q9NVL1 165 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 ARHGEF38Q9NXL2 777 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 RRN3Q9NYV6 651 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 COX16Q9P0S2 106 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 ARHGAP20Q9P2F6 1191 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 FBXO4Q9UKT5 387 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 SLC27A6Q9Y2P4 619 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 STARD13Q9Y3M8 1113 aa8.86□□□□□ -0.99
UBR1-204ENST00000563239 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.86□□□□□ -0.997e-7■□□□□ 8.4
UBR1-204ENST00000563239 A0A087X0T9 212 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 TBC1D3BA6NDS4 549 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 TBL1XO60907 577 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 PAGE1O75459 146 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 APOEP02649 317 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 FTLP02792 175 aaPredicted RBP8.85□□□□□ -0.99
UBR1-204ENST00000563239 CYBBP04839 570 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 SERPING1P05155 500 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 TPM3P06753 285 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 FAM228BP0C875 321 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 SLC2A3P11169 496 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 KRT3P12035 628 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 PDGFRAP16234 1089 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 TACR2P21452 398 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 HLA-FP30511 346 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 PTPN9P43378 593 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms