RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 RRP15Q9Y3B9 282 aaKnown RBP13.05□□□□□ -0.32
AC055717.2-201ENST00000561864 PCNTO95613 3336 aa13.05□□□□□ -0.32
AC055717.2-201ENST00000561864 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 TRDMT1O14717 391 aaKnown RBP13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 HOXA2O43364 376 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 B4GALT3O60512 393 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 METTL18O95568 372 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 CPP00450 1065 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 ERCC2P18074 760 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 MX2P20592 715 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 SERPINB6P35237 376 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 MSH2P43246 934 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 OR1G1P47890 313 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 CDK7P50613 346 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 PKN2Q16513 984 aaKnown RBP13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 FAXCQ5TGI0 409 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 YTHDF3Q7Z739 585 aaKnown RBP13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 CAND1Q86VP6 1230 aaKnown RBP13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 ZNF280BQ86YH2 543 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 FAM126BQ8IXS8 530 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 CACNA2D3Q8IZS8 1091 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 CNPY4Q8N129 248 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 ADAM32Q8TC27 787 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 DCAKDQ8WVC6 231 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 EDEM1Q92611 657 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 ALKBH8Q96BT7 664 aaKnown RBP13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 SMOC2Q9H3U7 446 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 WDCPQ9H6R7 721 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 TMPRSS4Q9NRS4 437 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 MFHAS1Q9Y4C4 1052 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 TTLL3Q9Y4R7 772 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 FAM169AQ9Y6X4 670 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 TANC1Q9C0D5 1861 aa13.04□□□□□ -0.32
AC055717.2-201ENST00000561864 IQANK1A0A1B0GTG1 560 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 TCRBV9S1A1TA0A576 114 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 OR6C75A6NL08 312 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 TNFRSF10BO14763 440 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 TRIM66O15016 1216 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 IRAK2O43187 625 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 KIAA0754O94854 1291 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 CREB1P16220 341 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 GBP2P32456 591 aaPredicted RBP13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 GRIK1P39086 918 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 MAGEA11P43364 429 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 SLC5A3P53794 718 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 GALNT2Q10471 571 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 AP1B1Q10567 949 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 EFTUD2Q15029 972 aaKnown RBP eCLIP13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 PARP6Q2NL67 630 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 SLC39A12Q504Y0 691 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 PLEKHG4Q58EX7 1191 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 ZNF534Q76KX8 674 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 IGDCC3Q8IVU1 814 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 LRRC34Q8IZ02 419 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 ABI1Q8IZP0 508 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 ARHGAP18Q8N392 663 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 ANKRD42Q8N9B4 389 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 SLC44A1Q8WWI5 657 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 SEPT8Q92599 483 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 P2RY11Q96G91 374 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 SEC16BQ96JE7 1060 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 C8orf48Q96LL4 319 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 MAGEB18Q96M61 343 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 LGMNQ99538 433 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 TKTL2Q9H0I9 626 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 ARHGEF38Q9NXL2 777 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 IGSF9Q9P2J2 1179 aa13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 ZC3H7BQ9UGR2 993 aaKnown RBP13.03□□□□□ -0.32
AC055717.2-201ENST00000561864 MYO16Q9Y6X6 1858 aa13.02□□□□□ -0.32
AC055717.2-201ENST00000561864 F8W810 466 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 FAM72CH0Y354 149 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 I6L893 689 aaPredicted RBP13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 TADA2AO75478 443 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 ZWINTO95229 277 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 VIMP08670 466 aaKnown RBP13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 PRKCHP24723 683 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 IFNAR2P48551 515 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 COG7P83436 770 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 IL9RQ01113 521 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 PPARDQ03181 441 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 PPIDQ08752 370 aaKnown RBP13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 WASHC5Q12768 1159 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 EIF4EBP2Q13542 120 aaPredicted RBP13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 MPP2Q14168 576 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 SPARCL1Q14515 664 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 ITIH4Q14624 930 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 PPP2R5DQ14738 602 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 QPCTQ16769 361 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 FAM72AQ5TYM5 149 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 BTBD8Q5XKL5 378 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 FAM72DQ6L9T8 149 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 ZNF280DQ6N043 979 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 DENND5BQ6ZUT9 1274 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 CTU1Q7Z7A3 348 aaKnown RBP13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 FAM72BQ86X60 149 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 CCNJLQ8IV13 435 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms