RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	EIF1AD	Q8N9N8	165 aa	Known RBP	7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	FAM71B	Q8TC56	605 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	CASP10	Q92851	521 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	IGSF21	Q96ID5	467 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	C8orf48	Q96LL4	319 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	NPY6R	Q99463	290 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	ERP44	Q9BS26	406 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	VN1R3	Q9BXE9	311 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	RAB17	Q9H0T7	212 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	ADAM7	Q9H2U9	754 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	PCDH18	Q9HCL0	1135 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	ENTPD7	Q9NQZ7	604 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	RRN3	Q9NYV6	651 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	LIMD1	Q9UGP4	676 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	FBXL21	Q9UKT6	434 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	UTP11	Q9Y3A2	253 aa	Known RBP	7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	PCDHB5	Q9Y5E4	795 aa		7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	ANKRD11	Q6UB99	2663 aa	Predicted RBP	7.81	□□□□□ -1.16
TPM1-231	ENST00000561395	MTMR11	A4FU01	709 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	HIDE1	A8MVS5	230 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	CAPN9	O14815	690 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	ATP8B1	O43520	1251 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	LIAS	O43766	372 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	VNN2	O95498	520 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	ADRB1	P08588	477 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	NCAM1	P13591	858 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	SDHB	P21912	280 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	ECHS1	P30084	290 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	MTHFR	P42898	656 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	KCNJ1	P48048	391 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	PITX1	P78337	314 aa	Predicted RBP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	KRT17	Q04695	432 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	GPR17	Q13304	367 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	NNT	Q13423	1086 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	SNX1	Q13596	522 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	PTK6	Q13882	451 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	KRT81	Q14533	505 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	TRADD	Q15628	312 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	DPYSL2	Q16555	572 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	CA9	Q16790	459 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	USP41	Q3LFD5	358 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	ZC3H12A	Q5D1E8	599 aa	Known RBP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	ERMARD	Q5T6L9	678 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	SYPL2	Q5VXT5	272 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	EMB	Q6PCB8	327 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	DRICH1	Q6PGQ1	229 aa	Predicted RBP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	KCNT2	Q6UVM3	1135 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	RSPO2	Q6UXX9	243 aa	Predicted RBP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	MAMSTR	Q6ZN01	415 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	SYDE1	Q6ZW31	735 aa	Predicted RBP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	BEND5	Q7L4P6	421 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	RFX6	Q8HWS3	928 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	PSTK	Q8IV42	348 aa	Known RBP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	MAP7D3	Q8IWC1	876 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	SCN4B	Q8IWT1	228 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	SLC39A11	Q8N1S5	342 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	CCDC185	Q8N715	623 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	COLGALT1	Q8NBJ5	622 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	TTC13	Q8NBP0	860 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	SCAMP5	Q8TAC9	235 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	SPPL2B	Q8TCT7	592 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	GRK7	Q8WTQ7	553 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	C2orf15	Q8WU43	125 aa	Known RBP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	IFT81	Q8WYA0	676 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	PIK3R5	Q8WYR1	880 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	CAVIN3	Q969G5	261 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	FAF2	Q96CS3	445 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	PGAP3	Q96FM1	320 aa	Predicted RBP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	ZNF558	Q96NG5	402 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	KCTD15	Q96SI1	283 aa	Predicted RBP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	TCF25	Q9BQ70	676 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	ZNF670	Q9BS34	389 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	TRIM62	Q9BVG3	475 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	HERC2P3	Q9BVR0	1158 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	CALN1	Q9BXU9	219 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	FUT8	Q9BYC5	575 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	FAM117A	Q9C073	453 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	FAM114A2	Q9NRY5	505 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	PIGV	Q9NUD9	493 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	GPATCH2L	Q9NWQ4	482 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	MTRR	Q9UBK8	725 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	FEZ2	Q9UHY8	353 aa	Predicted RBP	7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	FZD10	Q9ULW2	581 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	NFU1	Q9UMS0	254 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	DUSP12	Q9UNI6	340 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	AP4E1	Q9UPM8	1137 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	NAALADL1	Q9UQQ1	740 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	BACE2	Q9Y5Z0	518 aa		7.8	□□□□□ -1.16
TPM1-231	ENST00000561395	APOC4-APOC2	K7ER74	178 aa		7.79	□□□□□ -1.16
TPM1-231	ENST00000561395		M0QYT0	321 aa		7.79	□□□□□ -1.16
TPM1-231	ENST00000561395	DAPK3	O43293	454 aa		7.79	□□□□□ -1.16
TPM1-231	ENST00000561395	CST8	O60676	142 aa		7.79	□□□□□ -1.16
TPM1-231	ENST00000561395	SASH3	O75995	380 aa		7.79	□□□□□ -1.16
TPM1-231	ENST00000561395	GAS8	O95995	478 aa		7.79	□□□□□ -1.16
TPM1-231	ENST00000561395	APOC2	P02655	101 aa		7.79	□□□□□ -1.16
TPM1-231	ENST00000561395	SOD2	P04179	222 aa		7.79	□□□□□ -1.16
TPM1-231	ENST00000561395	CPB1	P15086	417 aa		7.79	□□□□□ -1.16
TPM1-231	ENST00000561395	LAG3	P18627	525 aa		7.79	□□□□□ -1.16

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