RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 GABRR2P28476 465 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 EPHB2P29323 1055 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 IRS1P35568 1242 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 KCNJ1P48048 391 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 VCPP55072 806 aaKnown RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 EIF3EP60228 445 aaKnown RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 SMAD3P84022 425 aaKnown RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 SLC7A5Q01650 507 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 OTUD4Q01804 1114 aaKnown RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 NRG1Q02297 640 aaPredicted RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 ADCY2Q08462 1091 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 XRCC4Q13426 336 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 BRD3Q15059 726 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 MAP9Q49MG5 647 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 WDR93Q6P2C0 686 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 C1orf228Q6PIY5 440 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 TMCO3Q6UWJ1 677 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 RFX8Q6ZV50 586 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 CCHCR1Q8TD31 782 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 SLC22A17Q8WUG5 538 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 RSAD2Q8WXG1 361 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 ATG4AQ8WYN0 398 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.65□□□□□ -0.7
USP3-219ENST00000561326 NKD2Q969F2 451 aaPredicted RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 AZIN2Q96A70 460 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 PLD4Q96BZ4 506 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 TIFAQ96CG3 184 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 FCRL2Q96LA5 508 aaPredicted RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 CDCA3Q99618 268 aaPredicted RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 DDX50Q9BQ39 737 aaKnown RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 CORO1BQ9BR76 489 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 ERP44Q9BS26 406 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 HERPUD2Q9BSE4 406 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 CATSPERBQ9H7T0 1116 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 CERS4Q9HA82 394 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 EPB41L5Q9HCM4 733 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 MAN1C1Q9NR34 630 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 FAM114A2Q9NRY5 505 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 ZDHHC7Q9NXF8 308 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 ZMYM5Q9UJ78 669 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 R3HDM2Q9Y2K5 976 aaKnown RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 HEY1Q9Y5J3 304 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 TRANK1O15050 2925 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 CFAP69A5D8W1 941 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 H7C0C1 242 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 SGK1O00141 431 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 ZNF197O14709 1029 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 NDC80O14777 642 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 CCL16O15467 120 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 MOCS2O96007 188 aaPredicted RBP10.64□□□□□ -0.71
USP3-219ENST00000561326 IGLV3-27P01718 113 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 SRGAP2BP0DMP2 458 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 RBP3P10745 1247 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 MBL2P11226 248 aaPredicted RBP10.64□□□□□ -0.71
USP3-219ENST00000561326 MYL4P12829 197 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 SERPINB6P35237 376 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 ACTN2P35609 894 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 PTGIRP43119 386 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 ATP5OP48047 213 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 DRG2P55039 364 aaKnown RBP10.64□□□□□ -0.71
USP3-219ENST00000561326 GUCY2DQ02846 1103 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 SEMA3BQ13214 749 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 CUL1Q13616 776 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 DPYSQ14117 519 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 PDK1Q15118 436 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 NOMO1Q15155 1222 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 ARHGAP15Q53QZ3 475 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 RWDD4Q6NW29 188 aaKnown RBP10.64□□□□□ -0.71
USP3-219ENST00000561326 TTC27Q6P3X3 843 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 DARS2Q6PI48 645 aaKnown RBP10.64□□□□□ -0.71
USP3-219ENST00000561326 SPRED2Q7Z698 418 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 RBM23Q86U06 439 aaKnown RBP10.64□□□□□ -0.71
USP3-219ENST00000561326 JAMLQ86YT9 394 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 LZTR1Q8N653 840 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 PQLC3Q8N755 202 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 CCDC89Q8N998 374 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 EIF1ADQ8N9N8 165 aaKnown RBP10.64□□□□□ -0.71
USP3-219ENST00000561326 SLC35B2Q8TB61 432 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 TBC1D31Q96DN5 1066 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 MAGEB5Q9BZ81 275 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 PRKD2Q9BZL6 878 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 ATXN3LQ9H3M9 355 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 RETREG1Q9H6L5 497 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 TRPC7Q9HCX4 862 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 ZNF334Q9HCZ1 680 aaPredicted RBP10.64□□□□□ -0.71
USP3-219ENST00000561326 ARHGEF4Q9NR80 690 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 TMPRSS4Q9NRS4 437 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 SAE1Q9UBE0 346 aaPredicted RBP10.64□□□□□ -0.71
USP3-219ENST00000561326 DMGDHQ9UI17 866 aaKnown RBP10.64□□□□□ -0.71
USP3-219ENST00000561326 RAB21Q9UL25 225 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 DNPEPQ9ULA0 475 aa10.64□□□□□ -0.71
USP3-219ENST00000561326 NOTCH4Q99466 2003 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 CHD9Q3L8U1 2897 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 TRAV19A0A0A6YYK7 116 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 CCDC151A5D8V7 595 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 HACD1B0YJ81 288 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 FAM72CH0Y354 149 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 PER2O15055 1255 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 LRIG2O94898 1065 aa10.63□□□□□ -0.71
USP3-219ENST00000561326 OAS1P00973 400 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms