RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 ACSL4O60488 711 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 MOCS2O96007 188 aaPredicted RBP17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 SLC11A2P49281 568 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 ENPP2Q13822 863 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 KCNJ12Q14500 433 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 VWA3BQ502W6 1294 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 LYSMD4Q5XG99 296 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 RNF43Q68DV7 783 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 IL31Q6EBC2 164 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 UNC45BQ8IWX7 931 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 C1orf131Q8NDD1 294 aaKnown RBP17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 CPXM1Q96SM3 734 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 SAMSN1Q9NSI8 373 aaKnown RBP17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 ABCB8Q9NUT2 735 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 TLR6Q9Y2C9 796 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 CAPN9O14815 690 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 TBL1XO60907 577 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 PITX1P78337 314 aaPredicted RBP17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 NNTQ13423 1086 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 TAF5Q15542 800 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 PPM1JQ5JR12 505 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 PIK3R6Q5UE93 754 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 SERPINA13PQ6UXR4 307 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 CHST9Q7L1S5 443 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 TMEM110Q86TL2 294 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 SLC47A2Q86VL8 602 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 HJURPQ8NCD3 748 aaPredicted RBP17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 GPT2Q8TD30 523 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 CYB5D2Q8WUJ1 264 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 MYEOVQ96EZ4 313 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 SLC39A13Q96H72 371 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 TRIM62Q9BVG3 475 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 MKRN2Q9H000 416 aaKnown RBP17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 NUCKS1Q9H1E3 243 aaKnown RBP17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 POPDC2Q9HBU9 364 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 STIM2Q9P246 746 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 GGA2Q9UJY4 613 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 FHOD1Q9Y613 1164 aa17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 MAP1BP46821 2468 aaKnown RBP17.87■□□□□ 0.45
CDC42BPB-208ENST00000561271 CHD8Q9HCK8 2581 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 ACACBO00763 2458 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 KHNYNO15037 678 aaKnown RBP17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 NPC1O15118 1278 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 IRAK2O43187 625 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 AP5Z1O43299 807 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 PABPC1P11940 636 aaKnown RBP17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 HLA-EP13747 358 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 ITPKAP23677 461 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 CD70P32970 193 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 ARID5AQ03989 594 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 PTK2Q05397 1052 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 RAPGEF1Q13905 1077 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 DPY19L2P1Q6NXN4 242 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 SLC36A4Q6YBV0 504 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 WDTC1Q8N5D0 677 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 ZNF366Q8N895 744 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 WFIKKN2Q8TEU8 576 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 PLCB1Q9NQ66 1216 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 TMEM74BQ9NUR3 256 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 TAB2Q9NYJ8 693 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 XPO7Q9UIA9 1087 aaKnown RBP17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 PCDHGC3Q9UN70 934 aa17.86■□□□□ 0.45
CDC42BPB-208ENST00000561271 FOXN3O00409 490 aaPredicted RBP17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 SYNCRIPO60506 623 aaKnown RBP17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 ZNF217O75362 1048 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 TRUB2O95900 331 aaKnown RBP17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 IGLV3-25P01717 112 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 APOEP02649 317 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 EPHX1P07099 455 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 CLCN1P35523 988 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 RPS24P62847 133 aaKnown RBP17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 YWHAZP63104 245 aaKnown RBP17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 KCNMA1Q12791 1236 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 FNDC3BQ53EP0 1204 aaKnown RBP17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 ZC3H12AQ5D1E8 599 aaKnown RBP17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 TRIM61Q5EBN2 209 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 FAM183BPQ6ZVS7 135 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 BEND5Q7L4P6 421 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 ADIPOR2Q86V24 386 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 SYT12Q8IV01 421 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 SLC41A1Q8IVJ1 513 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 MFN1Q8IWA4 741 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 AHI1Q8N157 1196 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 CHD5Q8TDI0 1954 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 AZIN2Q96A70 460 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 PPP1R13BQ96KQ4 1090 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 HSPA12BQ96MM6 686 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 GBP4Q96PP9 640 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 LSM14BQ9BX40 385 aaKnown RBP17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 FAM204AQ9H8W3 233 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 PRDM16Q9HAZ2 1276 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 NFE2L3Q9Y4A8 694 aa17.85■□□□□ 0.45
CDC42BPB-208ENST00000561271 SYNJ2BP-COX16A0A087WUM0 186 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 FAM170AA1A519 330 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 TYW5A2RUC4 315 aaKnown RBP17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 GRAP2O75791 330 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 ERBB2P04626 1255 aa17.84■□□□□ 0.45
CDC42BPB-208ENST00000561271 COPAP53621 1224 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms