RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, human

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME1-208	ENST00000561059	NUMB	P49757	651 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	EIF4H	Q15056	248 aa	Known RBP	13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	TRIP6	Q15654	476 aa	Known RBP	13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	PKDCC	Q504Y2	493 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	RRAGA	Q7L523	313 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	METTL3	Q86U44	580 aa	Known RBP	13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	ADIPOR2	Q86V24	386 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	PPM1K	Q8N3J5	372 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	OR2T3	Q8NH03	318 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	SETD7	Q8WTS6	366 aa	Known RBP	13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	DNASE2B	Q8WZ79	361 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	SMARCE1	Q969G3	411 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	FAXDC2	Q96IV6	333 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	MIS12	Q9H081	205 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	OLA1	Q9NTK5	396 aa	Known RBP	13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	GGA2	Q9UJY4	613 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	MSRB2	Q9Y3D2	182 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	HBS1L	Q9Y450	684 aa	Known RBP	13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	NEUROG3	Q9Y4Z2	214 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	PCDHB9	Q9Y5E1	797 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	PCNX2	A6NKB5	2137 aa		13.96	□□□□□ -0.18
PSME1-208	ENST00000561059		A0A1B0GVT2	93 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	GOLGA6L4	A6NEF3	574 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	METTL12	A8MUP2	240 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	KCNK3	O14649	394 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	NPC1	O15118	1278 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	BCAT2	O15382	392 aa	Predicted RBP	13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	FTH1P19	P0C7X4	201 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	PABPC1	P11940	636 aa	Known RBP	13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	SLC6A4	P31645	630 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	CSNK1E	P49674	416 aa	Known RBP	13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	YWHAE	P62258	255 aa	Known RBP	13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	PTPRN	Q16849	979 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	ADGRF1	Q5T601	910 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	MBLAC2	Q68D91	279 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	LCLAT1	Q6UWP7	414 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	MARCH9	Q86YJ5	346 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	ARHGEF19	Q8IW93	802 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	ENGASE	Q8NFI3	743 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	ADAM32	Q8TC27	787 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	CCDC34	Q96HJ3	373 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	GSDMA	Q96QA5	445 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	NUP58	Q9BVL2	599 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	SLC2A11	Q9BYW1	496 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	LHX5	Q9H2C1	402 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	GAREM1	Q9H706	876 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	ABCC13	Q9NSE7	274 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	PLA2G4C	Q9UP65	541 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	CELSR3	Q9NYQ7	3312 aa		13.95	□□□□□ -0.18
PSME1-208	ENST00000561059	GOLGA8CP	A6NN73	597 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	SMC2	O95347	1197 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	SETSIP	P0DME0	302 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	HOXB3	P14651	431 aa	Predicted RBP	13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	OXTR	P30559	389 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	CAMK2G	Q13555	558 aa	Predicted RBP	13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	HLA-B	Q31612	363 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	CCDC40	Q4G0X9	1142 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	FAM133B	Q5BKY9	247 aa	Known RBP	13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	NADSYN1	Q6IA69	706 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	MMS22L	Q6ZRQ5	1243 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	CADM4	Q8NFZ8	388 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	SLC35F5	Q8WV83	523 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	KCTD13	Q8WZ19	329 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	NT5C1B	Q96P26	610 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	TMEM245	Q9H330	911 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	PRSS16	Q9NQE7	514 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	CNGB3	Q9NQW8	809 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	MAN1B1	Q9UKM7	699 aa		13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
PSME1-208	ENST00000561059	NUMA1	Q14980	2115 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	TAF4	O00268	1085 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	BIN1	O00499	593 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	TIMM44	O43615	452 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	FSBP	O95073	299 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	MOCS2	O96007	188 aa	Predicted RBP	13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	IGLV3-19	P01714	112 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	LTF	P02788	710 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	TBXAS1	P24557	533 aa	Predicted RBP	13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	ZNF132	P52740	706 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	STX17	P56962	302 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	TBX4	P57082	545 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	RPS14	P62263	151 aa	Known RBP	13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	RPS24	P62847	133 aa	Known RBP	13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	LRRC63	Q05C16	580 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	SLC14A1	Q13336	389 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	KIF19	Q2TAC6	998 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	COBLL1	Q53SF7	1204 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	PIK3R6	Q5UE93	754 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	MSANTD2	Q6P1R3	559 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	SLCO6A1	Q86UG4	719 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	AHI1	Q8N157	1196 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	CFAP52	Q8N1V2	620 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	SPATA20	Q8TB22	786 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	WFIKKN2	Q8TEU8	576 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	STOML2	Q9UJZ1	356 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	PCOLCE2	Q9UKZ9	415 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms