RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 PRUNE1Q86TP1 453 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 VPS52Q8N1B4 723 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 PHOSPHO2Q8TCD6 241 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 TFB1MQ8WVM0 346 aaKnown RBP17.69■□□□□ 0.42
HDDC3-206ENST00000561036 CLP1Q92989 425 aaKnown RBP17.69■□□□□ 0.42
HDDC3-206ENST00000561036 SLC39A13Q96H72 371 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 C1orf74Q96LT6 269 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 MRPL17Q9NRX2 175 aaKnown RBP17.69■□□□□ 0.42
HDDC3-206ENST00000561036 ETNK2Q9NVF9 386 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 PLAAQ9Y263 795 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 FARP1Q9Y4F1 1045 aaPredicted RBP17.69■□□□□ 0.42
HDDC3-206ENST00000561036 BRCA2P51587 3418 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 C5orf60A6NFR6 353 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 GOLGA8KD6RF30 607 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 FAM72CH0Y354 149 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 H0YGN5 161 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 H3BQF6 201 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 C2CD2LO14523 706 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 PPP1R12AO14974 1030 aaPredicted RBP17.68■□□□□ 0.42
HDDC3-206ENST00000561036 KCNN4O15554 427 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 CSH1P0DML2 217 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 CSH2P0DML3 217 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 ERCC2P18074 760 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 RBL1P28749 1068 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 OAS2P29728 719 aaKnown RBP17.68■□□□□ 0.42
HDDC3-206ENST00000561036 SERPINB6P35237 376 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 TRIP4Q15650 581 aaPredicted RBP17.68■□□□□ 0.42
HDDC3-206ENST00000561036 TMEM240Q5SV17 173 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 FAM72AQ5TYM5 149 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 DENND2CQ68D51 928 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 FAM72DQ6L9T8 149 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 CROCCP2Q86T23 111 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 FAM72BQ86X60 149 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 GPR152Q8TDT2 470 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 HERVK_113Q902F9 699 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 RXFP1Q9HBX9 757 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 SFMBT1Q9UHJ3 866 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 NFS1Q9Y697 457 aa17.68■□□□□ 0.42
HDDC3-206ENST00000561036 CEP350Q5VT06 3117 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 FGF10O15520 208 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-206ENST00000561036 MFSD11O43934 449 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 LILRB3O75022 631 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 PAGE1O75459 146 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 STK10O94804 968 aaKnown RBP17.67■□□□□ 0.42
HDDC3-206ENST00000561036 LRIG2O94898 1065 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 MX2P20592 715 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 HOXC13P31276 330 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 ALDH1A3P47895 512 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 TBX4P57082 545 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 FAM193AP78312 1265 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 RING1Q06587 406 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 CBLBQ13191 982 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 PRKD1Q15139 912 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-206ENST00000561036 RASIP1Q5U651 963 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 MANEALQ5VSG8 457 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 TCEAL8Q8IYN2 117 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 NAT8LQ8N9F0 302 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 SP7Q8TDD2 431 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-206ENST00000561036 GIPC2Q8TF65 315 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 PRCCQ92733 491 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-206ENST00000561036 TRMT2BQ96GJ1 504 aaKnown RBP17.67■□□□□ 0.42
HDDC3-206ENST00000561036 MYRFLQ96LU7 910 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 ZBED2Q9BTP6 218 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 FRMD8Q9BZ67 464 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-206ENST00000561036 EPB41L4BQ9H329 900 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 C10orf88Q9H8K7 445 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 SLC12A6Q9UHW9 1150 aa17.67■□□□□ 0.42
HDDC3-206ENST00000561036 PTPRSQ13332 1948 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 GREB1Q4ZG55 1949 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 CHADO15335 359 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 EIF3HO15372 352 aaKnown RBP eCLIP17.66■□□□□ 0.42
HDDC3-206ENST00000561036 MSI1O43347 362 aaKnown RBP17.66■□□□□ 0.42
HDDC3-206ENST00000561036 FGF18O76093 207 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 SEC24AO95486 1093 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 APOEP02649 317 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 EPHB2P29323 1055 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 CHKAP35790 457 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 MAGEA6P43360 314 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 PPP3CCP48454 512 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 ZNF33AQ06730 810 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 VEPH1Q14D04 833 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 C10orf120Q5SQS8 335 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 HEATR6Q6AI08 1181 aaKnown RBP17.66■□□□□ 0.42
HDDC3-206ENST00000561036 KLHDC10Q6PID8 442 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 PPP1R21Q6ZMI0 780 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 CCDC25Q86WR0 208 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 LZTR1Q8N653 840 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 STKLD1Q8NE28 680 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 HTR3CQ8WXA8 447 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 CPT1BQ92523 772 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 TBC1D31Q96DN5 1066 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 FCRL2Q96LA5 508 aaPredicted RBP17.66■□□□□ 0.42
HDDC3-206ENST00000561036 RAD9AQ99638 391 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 ZBP1Q9H171 429 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 SEMA4AQ9H3S1 761 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 CATSPERBQ9H7T0 1116 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 CYP4F11Q9HBI6 524 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 MARCH2Q9P0N8 246 aa17.66■□□□□ 0.42
HDDC3-206ENST00000561036 HBS1LQ9Y450 684 aaKnown RBP17.66■□□□□ 0.42
HDDC3-206ENST00000561036 GOLGA6L10A6NI86 522 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms