RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ZNF518BQ9C0D4 1074 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 WDR55Q9H6Y2 383 aaPredicted RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 NXF1Q9UBU9 619 aaKnown RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 FAM189A1O60320 539 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 METTL18O95568 372 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 ASS1P00966 412 aaKnown RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 HMGCRP04035 888 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 PTPN1P18031 435 aaKnown RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 ACAT1P24752 427 aaKnown RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 ABCD1P33897 745 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 NAA20P61599 178 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 KRT76Q01546 638 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 ANKDD1AQ495B1 522 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 KCTD21Q4G0X4 260 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 ITPRIPL1Q6GPH6 555 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 ZBTB33Q86T24 672 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 PATL1Q86TB9 770 aaKnown RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 KBTBD7Q8WVZ9 684 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 SERPINI1Q99574 410 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 RAVER2Q9HCJ3 691 aaKnown RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 XPNPEP3Q9NQH7 507 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 PFDN4Q9NQP4 134 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 FAIMQ9NVQ4 179 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 AFG3L2Q9Y4W6 797 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 PCDHA10Q9Y5I2 948 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 NR2E3Q9Y5X4 410 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 WDR27A2RRH5 827 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 GRAP2O75791 330 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 EDN1P05305 212 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 MYL4P12829 197 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 FGFR3P22607 806 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 CDH15P55291 814 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 PGM5Q15124 567 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 C15orf59Q2T9L4 293 aaPredicted RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 BSPRYQ5W0U4 402 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 SCYL2Q6P3W7 929 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 BORAQ6PGQ7 559 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 BNC2Q6ZN30 1099 aaPredicted RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 TICAM1Q8IUC6 712 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 BBS5Q8N3I7 341 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 CATSPER1Q8NEC5 780 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 ATP2A3Q93084 1043 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 ATXN7L3BQ96GX2 97 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 DCUN1D5Q9BTE7 237 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 CYP26B1Q9NR63 512 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 PSAT1Q9Y617 370 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 K7ERI5 159 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 HSPA4LO95757 839 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 PIK3R1P27986 724 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 SFNP31947 248 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 PLD5Q8N7P1 536 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 KYQ8NBH2 561 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 MCPH1Q8NEM0 835 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 GIPC3Q8TF64 312 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 EME1Q96AY2 570 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 RCN3Q96D15 328 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 DOLKQ9UPQ8 538 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 RNF11Q9Y3C5 154 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 TMEM221A6NGB7 291 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 DGAT1O75907 488 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 CSPG5O95196 566 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 RPL10P27635 214 aaKnown RBP16.94■□□□□ 0.3
TPM1-228ENST00000560975 TCF7P36402 384 aaPredicted RBP16.94■□□□□ 0.3
TPM1-228ENST00000560975 RPS6P62753 249 aaKnown RBP16.94■□□□□ 0.3
TPM1-228ENST00000560975 ENPEPQ07075 957 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 CEACAM7Q14002 265 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 ZNF534Q76KX8 674 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 XYLT1Q86Y38 959 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 PPP1R14BQ96C90 147 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 KLHL32Q96NJ5 620 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 COPG2Q9UBF2 871 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 PCDHA11Q9Y5I1 949 aa16.94■□□□□ 0.3
TPM1-228ENST00000560975 RNASEH2AO75792 299 aaKnown RBP16.93■□□□□ 0.3
TPM1-228ENST00000560975 PRKCGP05129 697 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 ICAM1P05362 532 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 GRK2P25098 689 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 BCAR1P56945 870 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 YWHAEP62258 255 aaKnown RBP16.93■□□□□ 0.3
TPM1-228ENST00000560975 TFDP2Q14188 446 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 ZNF423Q2M1K9 1284 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 MARK4Q96L34 752 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 PRMT6Q96LA8 375 aaPredicted RBP16.93■□□□□ 0.3
TPM1-228ENST00000560975 WRNIP1Q96S55 665 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 RMDN3Q96TC7 470 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 HAUS8Q9BT25 410 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 NIF3L1Q9GZT8 377 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 INIPQ9NRY2 104 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 EPS15L1Q9UBC2 864 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 QSER1Q2KHR3 1735 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 C7orf72A4D263 438 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 P4HA1P13674 534 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 CD97P48960 835 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 CDK9P50750 372 aaKnown RBP16.93■□□□□ 0.3
TPM1-228ENST00000560975 FAM102AQ5T9C2 384 aaPredicted RBP16.93■□□□□ 0.3
TPM1-228ENST00000560975 CMC1Q7Z7K0 106 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 FAM160B2Q86V87 743 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 DEPTORQ8TB45 409 aa16.93■□□□□ 0.3
TPM1-228ENST00000560975 GFM2Q969S9 779 aaKnown RBP16.93■□□□□ 0.3
TPM1-228ENST00000560975 ZNF219Q9P2Y4 722 aaPredicted RBP16.93■□□□□ 0.3
TPM1-228ENST00000560975 CLRN2A0PK11 232 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms