RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 FAM209AQ5JX71 171 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 GPATCH4Q5T3I0 446 aaKnown RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 OGFRL1Q5TC84 451 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 SYDE2Q5VT97 1194 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 C1orf146Q5VVC0 180 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 RWDD4Q6NW29 188 aaKnown RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 Q6ZNX1 250 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 NCCRP1Q6ZVX7 275 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 ENOSF1Q7L5Y1 443 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 ARPINQ7Z6K5 226 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 DZIP1Q86YF9 867 aaKnown RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 ERI1Q8IV48 349 aaKnown RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 RHOT1Q8IXI2 618 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 DMRTC2Q8IXT2 367 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 EXD1Q8NHP7 514 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 C17orf50Q8WW18 174 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 C1orf54Q8WWF1 131 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 SHC3Q92529 594 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 SLC35B4Q969S0 331 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 DYDC2Q96IM9 177 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 EXOC2Q96KP1 924 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 C9orf72Q96LT7 481 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 LRGUKQ96M69 825 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 EYA3Q99504 573 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 IER2Q9BTL4 223 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 EBF3Q9H4W6 596 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 ACSS3Q9H6R3 686 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 PLGRKTQ9HBL7 147 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 PCDH9Q9HC56 1237 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 TRPV5Q9NQA5 729 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 CHST7Q9NS84 486 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 TJP2Q9UDY2 1190 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 SLC7A8Q9UHI5 535 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 BCAP29Q9UHQ4 241 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 ITGA11Q9UKX5 1188 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 BARX2Q9UMQ3 279 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 STX8Q9UNK0 236 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 AP4E1Q9UPM8 1137 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 CHMP2BQ9UQN3 213 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 SUGT1Q9Y2Z0 365 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 SQORQ9Y6N5 450 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 ASTN2O75129 1339 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 CLUHO75153 1309 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 COL4A1P02462 1669 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 QSER1Q2KHR3 1735 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 TRBV23-1A0A0A0MS06 115 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 A0A0G2JND7 137 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 NPHP3-ACAD11A0A0J9YXS1 232 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 A0A1W2PQU0 124 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SH3PXD2BA1X283 911 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 ANKRD34BA5PLL1 514 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 KIAA1324LA8MWY0 1029 aaPredicted RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 POC1B-GALNT4F8VUJ3 575 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 I3L4J1 428 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 ZNF701M0R085 212 aaPredicted RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SNAP23O00161 211 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 PROSCO94903 275 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 KLHL2O95198 593 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CLPTM1O96005 669 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 ZBED1O96006 694 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 FOSP01100 380 aaPredicted RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 TFAP2AP05549 437 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 EPHX1P07099 455 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SPATA31D3P0C874 917 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 MYL2P10916 166 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 KRT4P19013 534 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 ADRA1DP25100 572 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 MAPK4P31152 587 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 HIBADHP31937 336 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CIITAP33076 1130 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 RFC4P35249 363 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 FDFT1P37268 417 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 MLH1P40692 756 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CCNFP41002 786 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 MFAP3P55082 362 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 OXCT1P55809 520 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 NUP107P57740 925 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 FMO1Q01740 532 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 WASHC5Q12768 1159 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 MPP3Q13368 585 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SNAPC2Q13487 334 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 BTG3Q14201 252 aaPredicted RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 LPIN1Q14693 890 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 ARHGAP44Q17R89 818 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 MMEL1Q495T6 779 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CBWD6Q4V339 395 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SFT2D3Q587I9 215 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CBWD3Q5JTY5 395 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 CBWD5Q5RIA9 395 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 RNASEH2BQ5TBB1 312 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 YOD1Q5VVQ6 348 aaPredicted RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 ZFP1Q6P2D0 407 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 PGM2L1Q6PCE3 622 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 KLHDC10Q6PID8 442 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 PACS1Q6VY07 963 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 TRIM72Q6ZMU5 477 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 C20orf204Q6ZNR8 217 aa6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 RBM44Q6ZP01 1051 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-209ENST00000560307 SPATA31D4Q6ZUB0 917 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms