RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 SLC6A17Q9H1V8 727 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 PDCL3Q9H2J4 239 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 SYNCQ9H7C4 482 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 FAM204AQ9H8W3 233 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 POLMQ9NP87 494 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 CALCOCO1Q9P1Z2 691 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 STIM2Q9P246 746 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 BCCIPQ9P287 314 aaKnown RBP eCLIP12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 STON1Q9Y6Q2 735 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 CACNA1AO00555 2505 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 SYNJ2BP-COX16A0A087WUM0 186 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 TBL1XO60907 577 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 HSF2BPO75031 334 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 ALDH1A2O94788 518 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 GLI1P08151 1106 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 TFE3P19532 575 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 GBP1P32455 592 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 CD70P32970 193 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 SOX5P35711 763 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 IL12RB1P42701 662 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 SLC6A3Q01959 620 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 USP39Q53GS9 565 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 EFHC1Q5JVL4 640 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 OTUD1Q5VV17 481 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 NAA35Q5VZE5 725 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 RNF43Q68DV7 783 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 SLC26A9Q7LBE3 791 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 TRMT11Q7Z4G4 463 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 CFAP52Q8N1V2 620 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 PGBD3Q8N328 593 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 ANKRD20A12PQ8NF67 263 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 IPO4Q8TEX9 1081 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 CPA5Q8WXQ8 436 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 ZC3H10Q96K80 434 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 PCMTD1Q96MG8 357 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 TRIM62Q9BVG3 475 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 CIPCQ9C0C6 399 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 ARRDC1-AS1Q9H2J1 176 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 SMOC1Q9H4F8 434 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 ABCB8Q9NUT2 735 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 ASNSD1Q9NWL6 643 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 DDIT4Q9NX09 232 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 ELOVL2Q9NXB9 296 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 COX16Q9P0S2 106 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 MBD1Q9UIS9 605 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 USP18Q9UMW8 372 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 CEP83Q9Y592 693 aa12.09□□□□□ -0.47
RABGGTA-216ENST00000560243 CKAP5Q14008 2032 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 NUP205Q92621 2012 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 PLXND1Q9Y4D7 1925 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 KCNU1A8MYU2 1149 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 TEX33O43247 280 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 DAB1O75553 588 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 NDUFV2P19404 249 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 PRKCHP24723 683 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 P2RY2P41231 377 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 GABRB2P47870 512 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 ZNF445P59923 1031 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 RNASE9P60153 205 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 NOMO3P69849 1222 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 CDK17Q00537 523 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 FMO1Q01740 532 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 ZNF234Q14588 700 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 MAP7D1Q3KQU3 841 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 MS4A13Q5J8X5 152 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 RAP1GAP2Q684P5 730 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 SDE2Q6IQ49 451 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 TRNP1Q6NT89 227 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 MMS22LQ6ZRQ5 1243 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 ADIPOR2Q86V24 386 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 XYLT1Q86Y38 959 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 LGI2Q8N0V4 545 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 NEK11Q8NG66 645 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 CYB5D2Q8WUJ1 264 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 RMDN1Q96DB5 314 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 C18orf8Q96DM3 657 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 LMLNQ96KR4 655 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 ERGIC2Q96RQ1 377 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 BPIFA3Q9BQP9 254 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 CD93Q9NPY3 652 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 SEMA4GQ9NTN9 838 aa12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 THAP10Q9P2Z0 257 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-216ENST00000560243 MUC22E2RYF6 1773 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 SYCE3A1L190 88 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 GOLGA8SH3BPF8 625 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 EPN2O95208 641 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 LSM8O95777 96 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 APOEP02649 317 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 PABPC1P11940 636 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 TACR2P21452 398 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 GGCXP38435 758 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 ZNF165P49910 485 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 CDR2Q01850 454 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 ARID5AQ03989 594 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 NME3Q13232 169 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 ENPP2Q13822 863 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 IQCB1Q15051 598 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 SF3A2Q15428 464 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms