RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CALB1P05937 261 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 C8AP07357 584 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 TNNT1P13805 278 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 ATF2P15336 505 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 PAX3P23760 479 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 ANXA13P27216 316 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 RFC1P35251 1148 aaPredicted RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 MAGEA11P43364 429 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 NOP2P46087 812 aaKnown RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 GABRB2P47870 512 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 MARCKSL1P49006 195 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 NAP1L1P55209 391 aaKnown RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 DAOAP59103 153 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 GPC5P78333 572 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 KRT83P78385 493 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 CYP4F8P98187 520 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 HYAL1Q12794 435 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 RAB33AQ14088 237 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 MESDQ14696 234 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 STILQ15468 1287 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 MAPRE1Q15691 268 aaKnown RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 CDO1Q16878 200 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 KCTD19Q17RG1 926 aaPredicted RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 CFAP221Q4G0U5 840 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 HS1BP3Q53T59 392 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 RAB41Q5JT25 222 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 STXBP5Q5T5C0 1151 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 SYPL2Q5VXT5 272 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 ANKRD34AQ69YU3 496 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 TXNRD3NBQ6F5E7 133 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 FDX2Q6P4F2 183 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 SCD5Q86SK9 330 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 TMEM110Q86TL2 294 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 FMNL3Q8IVF7 1028 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 SIX6OS1Q8N1H7 587 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 SLC35F6Q8N357 371 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 KREMEN2Q8NCW0 462 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 SLC35G2Q8TBE7 412 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 SPPL2BQ8TCT7 592 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 IPO4Q8TEX9 1081 aaKnown RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 UBASH3BQ8TF42 649 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 CTNNBL1Q8WYA6 563 aaPredicted RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 RFFLQ8WZ73 363 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 FBXO32Q969P5 355 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 FAM149B1Q96BN6 582 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 C18orf8Q96DM3 657 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 TCEAL4Q96EI5 215 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 MCRS1Q96EZ8 462 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 KLHDC7BQ96G42 594 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 WDR24Q96S15 920 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 PSMB7Q99436 277 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 SELENOOQ9BVL4 669 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 EMILIN2Q9BXX0 1053 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 MAGEB5Q9BZ81 275 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 FAM124BQ9H5Z6 455 aaPredicted RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 ZNF576Q9H609 170 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 LRRC4Q9HBW1 653 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 RRAGDQ9NQL2 400 aaPredicted RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 KLHL11Q9NVR0 708 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 KCNK4Q9NYG8 393 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 SMARCAL1Q9NZC9 954 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 COX16Q9P0S2 106 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 FNIP2Q9P278 1114 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 FOXD3Q9UJU5 478 aaPredicted RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 ANAPC7Q9UJX3 599 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 KIAA1257Q9ULG3 409 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 RNF112Q9ULX5 631 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 NAALADL1Q9UQQ1 740 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 HCFC2Q9Y5Z7 792 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 DOCK6Q96HP0 2047 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 ATP8B3O60423 1300 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 ZNF638Q14966 1978 aaKnown RBP5.46□□□□□ -1.54
SPG11-220ENST00000559933 C2orf16Q68DN1 1984 aa5.46□□□□□ -1.54
SPG11-220ENST00000559933 UNC80Q8N2C7 3258 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 C2orf78A6NCI8 922 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ENC1O14682 589 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 SCAMP3O14828 347 aaKnown RBP5.45□□□□□ -1.54
SPG11-220ENST00000559933 DDX3YO15523 660 aaKnown RBP5.45□□□□□ -1.54
SPG11-220ENST00000559933 PJA2O43164 708 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 NDUFB5O43674 189 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ICMTO60725 284 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 DAB1O75553 588 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 TBX18O95935 607 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ZBED1O96006 694 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ATP1A1P05023 1023 aaKnown RBP5.45□□□□□ -1.54
SPG11-220ENST00000559933 FYNP06241 537 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 RB1P06400 928 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 GZMAP12544 262 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 HMGA1P17096 107 aaKnown RBP5.45□□□□□ -1.54
SPG11-220ENST00000559933 PSMA2P25787 234 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 CCR2P41597 374 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 RPL34P49207 117 aaKnown RBP5.45□□□□□ -1.54
SPG11-220ENST00000559933 MRPS5P82675 430 aaKnown RBP5.45□□□□□ -1.54
SPG11-220ENST00000559933 SLC6A3Q01959 620 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 UBE3AQ05086 875 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 KIF5AQ12840 1032 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 TAF10Q12962 218 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 LLGL1Q15334 1064 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 CLUL1Q15846 466 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 NFE2Q16621 373 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms