RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 PIK3R6Q5UE93 754 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 RAP1GAP2Q684P5 730 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 CHSY1Q86X52 802 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 RFX6Q8HWS3 928 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 PSTKQ8IV42 348 aaKnown RBP10.8□□□□□ -0.68
TPM1-221ENST00000559831 MAP7D3Q8IWC1 876 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 NPAS3Q8IXF0 933 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 ZSCAN18Q8TBC5 510 aaPredicted RBP10.8□□□□□ -0.68
TPM1-221ENST00000559831 SH3RF2Q8TEC5 729 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 MSLNLQ96KJ4 702 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 BTN2A3PQ96KV6 586 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 HAPLN3Q96S86 360 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 EPAS1Q99814 870 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 HEMGNQ9BXL5 484 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 MAK16Q9BXY0 300 aaKnown RBP10.8□□□□□ -0.68
TPM1-221ENST00000559831 SMARCAL1Q9NZC9 954 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 ZMYM5Q9UJ78 669 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 CDC23Q9UJX2 597 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 LSM7Q9UK45 103 aaKnown RBP10.8□□□□□ -0.68
TPM1-221ENST00000559831 ARHGAP26Q9UNA1 814 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 CCL26Q9Y258 94 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 HS3ST4Q9Y661 456 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 MYOFQ9NZM1 2061 aa10.8□□□□□ -0.68
TPM1-221ENST00000559831 CDH23Q9H251 3354 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 C3orf70A6NLC5 250 aaPredicted RBP10.79□□□□□ -0.68
TPM1-221ENST00000559831 SOBPA7XYQ1 873 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 FAM72CH0Y354 149 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 CES2O00748 559 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 DAPK3O43293 454 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 ACSL4O60488 711 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 PRAMEF12O95522 483 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 FGGP02679 453 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 KRT10P13645 584 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 GOT1P17174 413 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 TACR2P21452 398 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 KCNA5P22460 613 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 GBP2P32456 591 aaPredicted RBP10.79□□□□□ -0.68
TPM1-221ENST00000559831 CDKN2BP42772 138 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 TPI1P60174 286 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 COPS2P61201 443 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 DYNLT1P63172 113 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 ZXDBP98169 803 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 COL19A1Q14993 1142 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 LONRF2Q1L5Z9 754 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 MS4A13Q5J8X5 152 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 FAM72AQ5TYM5 149 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 FAM72DQ6L9T8 149 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 RWDD4Q6NW29 188 aaKnown RBP10.79□□□□□ -0.68
TPM1-221ENST00000559831 POTEHQ6S545 545 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 ANKS1BQ7Z6G8 1248 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 ADAT2Q7Z6V5 191 aaKnown RBP10.79□□□□□ -0.68
TPM1-221ENST00000559831 C14orf80Q86SX3 495 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 FAM72BQ86X60 149 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 DDX42Q86XP3 938 aaKnown RBP eCLIP10.79□□□□□ -0.68
TPM1-221ENST00000559831 ARID3BQ8IVW6 561 aaPredicted RBP10.79□□□□□ -0.68
TPM1-221ENST00000559831 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.79□□□□□ -0.68
TPM1-221ENST00000559831 ADAMTS19Q8TE59 1207 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 FGF13Q92913 245 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 USP13Q92995 863 aaPredicted RBP10.79□□□□□ -0.68
TPM1-221ENST00000559831 OSBPL8Q9BZF1 889 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 DCLK3Q9C098 648 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 OSBPL2Q9H1P3 480 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 POMKQ9H5K3 350 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 TDP1Q9NUW8 608 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 MTMR10Q9NXD2 777 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 CWC15Q9P013 229 aaKnown RBP10.79□□□□□ -0.68
TPM1-221ENST00000559831 OR12D3Q9UGF7 316 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 VANGL2Q9ULK5 521 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 NUP205Q92621 2012 aa10.79□□□□□ -0.68
TPM1-221ENST00000559831 SHROOM3Q8TF72 1996 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 hCG_1818297A0A087WSY0 165 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 E9PAM4 449 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 F5H5T6 163 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 PGRMC1O00264 195 aaKnown RBP10.78□□□□□ -0.68
TPM1-221ENST00000559831 TRDMT1O14717 391 aaKnown RBP10.78□□□□□ -0.68
TPM1-221ENST00000559831 LRIG2O94898 1065 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 KLKB1P03952 638 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 AMPD1P23109 780 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 PAFAH1B1P43034 410 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 MTA1Q13330 715 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 AUHQ13825 339 aaKnown RBP10.78□□□□□ -0.68
TPM1-221ENST00000559831 TUBB2AQ13885 445 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 PPP2R5EQ16537 467 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 WHAMMP3Q1A5X7 153 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 ANKRD20A8PQ5CZ79 823 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 TFDP3Q5H9I0 405 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 FAM78AQ5JUQ0 283 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 NADSYN1Q6IA69 706 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 RFWD3Q6PCD5 774 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 LRRC31Q6UY01 552 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 SLC13A5Q86YT5 568 aaPredicted RBP10.78□□□□□ -0.68
TPM1-221ENST00000559831 LGI2Q8N0V4 545 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 RASGEF1CQ8N431 466 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 SMRP1Q8NCR6 262 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 ST13P5Q8NFI4 369 aaPredicted RBP10.78□□□□□ -0.68
TPM1-221ENST00000559831 FAM71BQ8TC56 605 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 TSC1Q92574 1164 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 TBC1D31Q96DN5 1066 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 CSPG4P5Q96PW8 444 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 MYADMQ96S97 322 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms