RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 HSF4Q9ULV5 492 aa12.31□□□□□ -0.44
CASC4-208ENST00000559151 B4E171 279 aa12.3□□□□□ -0.44
CASC4-208ENST00000559151 KAT7O95251 611 aa12.3□□□□□ -0.44
CASC4-208ENST00000559151 TBX18O95935 607 aa12.3□□□□□ -0.44
CASC4-208ENST00000559151 TSPAN7P41732 249 aa12.3□□□□□ -0.44
CASC4-208ENST00000559151 PCP4P48539 62 aa12.3□□□□□ -0.44
CASC4-208ENST00000559151 CCT8P50990 548 aa12.3□□□□□ -0.44
CASC4-208ENST00000559151 COPB1P53618 953 aaKnown RBP12.3□□□□□ -0.44
CASC4-208ENST00000559151 ANO7Q6IWH7 933 aa12.3□□□□□ -0.44
CASC4-208ENST00000559151 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.3□□□□□ -0.44
CASC4-208ENST00000559151 ANKRD44Q8N8A2 993 aa12.3□□□□□ -0.44
CASC4-208ENST00000559151 PAIP1Q9H074 479 aaKnown RBP12.3□□□□□ -0.44
CASC4-208ENST00000559151 CCDC151A5D8V7 595 aa12.29□□□□□ -0.44
CASC4-208ENST00000559151 C1RP00736 705 aa12.29□□□□□ -0.44
CASC4-208ENST00000559151 ALDOAP04075 364 aaKnown RBP12.29□□□□□ -0.44
CASC4-208ENST00000559151 FAM163BP0C2L3 166 aa12.29□□□□□ -0.44
CASC4-208ENST00000559151 DUSP1P28562 367 aa12.29□□□□□ -0.44
CASC4-208ENST00000559151 PNPLA4P41247 253 aa12.29□□□□□ -0.44
CASC4-208ENST00000559151 AARS2Q5JTZ9 985 aaKnown RBP12.29□□□□□ -0.44
CASC4-208ENST00000559151 HYIQ5T013 277 aa12.29□□□□□ -0.44
CASC4-208ENST00000559151 KYAT3Q6YP21 454 aaKnown RBP12.29□□□□□ -0.44
CASC4-208ENST00000559151 CLPBQ9H078 707 aa12.29□□□□□ -0.44
CASC4-208ENST00000559151 PREBQ9HCU5 417 aa12.29□□□□□ -0.44
CASC4-208ENST00000559151 FBXO9Q9UK97 447 aaPredicted RBP12.29□□□□□ -0.44
CASC4-208ENST00000559151 FZD4Q9ULV1 537 aa12.29□□□□□ -0.44
CASC4-208ENST00000559151 TBX20Q9UMR3 447 aa12.29□□□□□ -0.44
CASC4-208ENST00000559151 COPG1Q9Y678 874 aaKnown RBP12.29□□□□□ -0.44
CASC4-208ENST00000559151 C1QTNF3-AMACRE9PGA6 284 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 GRM8O00222 908 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 APEHP13798 732 aaKnown RBP12.28□□□□□ -0.44
CASC4-208ENST00000559151 RXRGP48443 463 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 GAB1Q13480 694 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 WDR45BQ5MNZ6 344 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 CBWD5Q5RIA9 395 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 IGFL4Q6B9Z1 124 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 NAPRTQ6XQN6 538 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 PCGF5Q86SE9 256 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 TBC1D1Q86TI0 1168 aaPredicted RBP12.28□□□□□ -0.44
CASC4-208ENST00000559151 TSPYL6Q8N831 410 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 BEND2Q8NDZ0 799 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 ZUFSPQ96AP4 578 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 MACROD1Q9BQ69 325 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 CIPCQ9C0C6 399 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 COL4A3Q01955 1670 aa12.28□□□□□ -0.44
CASC4-208ENST00000559151 GRID2IPA4D2P6 1211 aa12.27□□□□□ -0.45
CASC4-208ENST00000559151 PEX12O00623 359 aa12.27□□□□□ -0.45
CASC4-208ENST00000559151 IFIT1P09914 478 aaKnown RBP12.27□□□□□ -0.45
CASC4-208ENST00000559151 MAKP20794 623 aa12.27□□□□□ -0.45
CASC4-208ENST00000559151 CFHR3Q02985 330 aa12.27□□□□□ -0.45
CASC4-208ENST00000559151 LINC01465Q8N7H1 131 aa12.27□□□□□ -0.45
CASC4-208ENST00000559151 MAFAQ8NHW3 353 aaPredicted RBP12.27□□□□□ -0.45
CASC4-208ENST00000559151 HDAC2Q92769 488 aaKnown RBP12.27□□□□□ -0.45
CASC4-208ENST00000559151 KAZALD1Q96I82 304 aa12.27□□□□□ -0.45
CASC4-208ENST00000559151 ZNF341Q9BYN7 854 aa12.27□□□□□ -0.45
CASC4-208ENST00000559151 FOXJ2Q9P0K8 574 aa12.27□□□□□ -0.45
CASC4-208ENST00000559151 CYP3A7-CYP3A51PA0A087WV96 503 aa12.26□□□□□ -0.45
CASC4-208ENST00000559151 C3orf70A6NLC5 250 aaPredicted RBP12.26□□□□□ -0.45
CASC4-208ENST00000559151 DRD4P21917 467 aa12.26□□□□□ -0.45
CASC4-208ENST00000559151 CYP3A7P24462 503 aa12.26□□□□□ -0.45
CASC4-208ENST00000559151 AGTR2P50052 363 aa12.26□□□□□ -0.45
CASC4-208ENST00000559151 CYP4F2P78329 520 aa12.26□□□□□ -0.45
CASC4-208ENST00000559151 AKAP1Q92667 903 aaKnown RBP eCLIP12.26□□□□□ -0.45
CASC4-208ENST00000559151 PDLIM2Q96JY6 352 aa12.26□□□□□ -0.45
CASC4-208ENST00000559151 PPP1R10Q96QC0 940 aaKnown RBP12.26□□□□□ -0.45
CASC4-208ENST00000559151 ACAD9Q9H845 621 aa12.26□□□□□ -0.45
CASC4-208ENST00000559151 TLR8Q9NR97 1041 aaKnown RBP12.26□□□□□ -0.45
CASC4-208ENST00000559151 FYB1O15117 783 aa12.25□□□□□ -0.45
CASC4-208ENST00000559151 ORC4O43929 436 aa12.25□□□□□ -0.45
CASC4-208ENST00000559151 LYL1P12980 280 aa12.25□□□□□ -0.45
CASC4-208ENST00000559151 BDNFP23560 247 aa12.25□□□□□ -0.45
CASC4-208ENST00000559151 PGM1P36871 562 aa12.25□□□□□ -0.45
CASC4-208ENST00000559151 WDR5P61964 334 aaKnown RBP12.25□□□□□ -0.45
CASC4-208ENST00000559151 CDK18Q07002 472 aa12.25□□□□□ -0.45
CASC4-208ENST00000559151 GALNT2Q10471 571 aa12.25□□□□□ -0.45
CASC4-208ENST00000559151 IL21RQ9HBE5 538 aa12.25□□□□□ -0.45
CASC4-208ENST00000559151 IRAK4Q9NWZ3 460 aa12.25□□□□□ -0.45
CASC4-208ENST00000559151 GDAQ9Y2T3 454 aa12.25□□□□□ -0.45
CASC4-208ENST00000559151 NARSO43776 548 aaKnown RBP12.24□□□□□ -0.45
CASC4-208ENST00000559151 CAPN3P20807 821 aa12.24□□□□□ -0.45
CASC4-208ENST00000559151 SLC8A1P32418 973 aa12.24□□□□□ -0.45
CASC4-208ENST00000559151 PLA2G5P39877 138 aa12.24□□□□□ -0.45
CASC4-208ENST00000559151 TAP1Q03518 808 aa12.24□□□□□ -0.45
CASC4-208ENST00000559151 THOC5Q13769 683 aaKnown RBP12.24□□□□□ -0.45
CASC4-208ENST00000559151 LIPMQ5VYY2 423 aa12.24□□□□□ -0.45
CASC4-208ENST00000559151 BCDIN3DQ7Z5W3 292 aaKnown RBP12.24□□□□□ -0.45
CASC4-208ENST00000559151 PRRT2Q7Z6L0 340 aaPredicted RBP12.24□□□□□ -0.45
CASC4-208ENST00000559151 NPAS1Q99742 590 aa12.24□□□□□ -0.45
CASC4-208ENST00000559151 PHF7Q9BWX1 381 aaPredicted RBP12.24□□□□□ -0.45
CASC4-208ENST00000559151 STN1Q9H668 368 aaKnown RBP12.24□□□□□ -0.45
CASC4-208ENST00000559151 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.23□□□□□ -0.45
CASC4-208ENST00000559151 ZNF213O14771 459 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 ANP32CO43423 234 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 EXOC3O60645 756 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 IGFBP2P18065 325 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 PSMC2P35998 433 aaKnown RBP12.23□□□□□ -0.45
CASC4-208ENST00000559151 MFSD13AQ14CX5 517 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 ACAD10Q6JQN1 1059 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 DENND1BQ6P3S1 775 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 RASAL3Q86YV0 1011 aa12.23□□□□□ -0.45
CASC4-208ENST00000559151 LAS2Q8IYD9 372 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms