RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CHST9Q7L1S5 443 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 LPCAT2Q7L5N7 544 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 CYP2U1Q7Z449 544 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 PHLDB2Q86SQ0 1253 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 TMEM110Q86TL2 294 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 UNC45BQ8IWX7 931 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 CARNMT1Q8N4J0 409 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 SPACA7Q96KW9 195 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 GABRG3Q99928 467 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 MTG2Q9H4K7 406 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 FANCLQ9NW38 375 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 THAP10Q9P2Z0 257 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-208ENST00000558827 SLC27A6Q9Y2P4 619 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 CACNA1AO00555 2505 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 PI4KAP42356 2102 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 GFRA2O00451 464 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 TRUB2O95900 331 aaKnown RBP13□□□□□ -0.33
SMAD3-208ENST00000558827 IGLV3-27P01718 113 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 EPHX1P07099 455 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 ITPKAP23677 461 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 GGCXP38435 758 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 YWHAZP63104 245 aaKnown RBP13□□□□□ -0.33
SMAD3-208ENST00000558827 RPL6Q02878 288 aaKnown RBP13□□□□□ -0.33
SMAD3-208ENST00000558827 KRT31Q15323 416 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 FUT11Q495W5 492 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 PTPN20Q4JDL3 420 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 FNDC3BQ53EP0 1204 aaKnown RBP13□□□□□ -0.33
SMAD3-208ENST00000558827 PLA2G2CQ5R387 149 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 NUGGCQ68CJ6 796 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 CIR1Q86X95 450 aaPredicted RBP13□□□□□ -0.33
SMAD3-208ENST00000558827 FAM71AQ8IYT1 594 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 LGI2Q8N0V4 545 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 ENOX1Q8TC92 643 aaKnown RBP13□□□□□ -0.33
SMAD3-208ENST00000558827 STK32AQ8WU08 396 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 UCMAQ8WVF2 138 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 RNF34Q969K3 372 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 MRGPRX1Q96LB2 322 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 FAM81BQ96LP2 452 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 PRICKLE1Q96MT3 831 aaPredicted RBP13□□□□□ -0.33
SMAD3-208ENST00000558827 SYNCQ9H7C4 482 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 FAM204AQ9H8W3 233 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 POPDC2Q9HBU9 364 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 CD248Q9HCU0 757 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 VPS45Q9NRW7 570 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 TMEM74BQ9NUR3 256 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 CEP192Q8TEP8 1941 aa13□□□□□ -0.33
SMAD3-208ENST00000558827 IGHV1OR15-9A0A0B4J2B8 117 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 GOLGA6L22H0YM25 854 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 SART1O43290 800 aaKnown RBP12.99□□□□□ -0.33
SMAD3-208ENST00000558827 SYNCRIPO60506 623 aaKnown RBP12.99□□□□□ -0.33
SMAD3-208ENST00000558827 PABPC1P11940 636 aaKnown RBP12.99□□□□□ -0.33
SMAD3-208ENST00000558827 MAOBP27338 520 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 IRX4P78413 519 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 NME3Q13232 169 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 STARD3Q14849 445 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 NUMA1Q14980 2115 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 FSCBQ5H9T9 825 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 STPG1Q5TH74 334 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 MBLAC2Q68D91 279 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 SERPINA13PQ6UXR4 307 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 FAM124AQ86V42 546 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 CHSY1Q86X52 802 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 NETO1Q8TDF5 533 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 SLC39A13Q96H72 371 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 PCMTD1Q96MG8 357 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-208ENST00000558827 SERPINB11Q96P15 392 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 SLC2A11Q9BYW1 496 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 MKRN2Q9H000 416 aaKnown RBP12.99□□□□□ -0.33
SMAD3-208ENST00000558827 PRDM16Q9HAZ2 1276 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 NLRC4Q9NPP4 1024 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 FAM207AQ9NSI2 230 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-208ENST00000558827 DDIT4Q9NX09 232 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 GGA2Q9UJY4 613 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 STOML2Q9UJZ1 356 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 TLR6Q9Y2C9 796 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 PCDHGA5Q9Y5G8 931 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 SNX10Q9Y5X0 201 aa12.99□□□□□ -0.33
SMAD3-208ENST00000558827 C4orf47A7E2U8 309 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 GOLGA8SH3BPF8 625 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 SLC30A4O14863 429 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 EPHB6O15197 1021 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 IRAK2O43187 625 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 GFPT2O94808 682 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 APOEP02649 317 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 UCHL3P15374 230 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 TFE3P19532 575 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-208ENST00000558827 TACR2P21452 398 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 EEF1GP26641 437 aaKnown RBP12.98□□□□□ -0.33
SMAD3-208ENST00000558827 POLR2FP61218 127 aaKnown RBP12.98□□□□□ -0.33
SMAD3-208ENST00000558827 CDK17Q00537 523 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 RING1Q06587 406 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 LMAN2Q12907 356 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 BYSLQ13895 437 aaKnown RBP12.98□□□□□ -0.33
SMAD3-208ENST00000558827 UAP1L1Q3KQV9 507 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 MS4A13Q5J8X5 152 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 RNF43Q68DV7 783 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 IL31Q6EBC2 164 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 ERMP1Q7Z2K6 904 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 NOP9Q86U38 636 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms