RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 HNRNPCP07910 306 aaKnown RBP eCLIP4.89□□□□□ -1.63
PDE8A-209ENST00000558543 PDHA1P08559 390 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 FAM90A15PP0C7V4 464 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 FAM90A14PP0C7W9 464 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 ATP1A3P13637 1013 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 CD19P15391 556 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 DRD4P21917 467 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 CD6P30203 668 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 GATMP50440 423 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 CCT8P50990 548 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 PDE6CP51160 858 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 RBM5P52756 815 aaKnown RBP eCLIP4.89□□□□□ -1.635e-9■□□□□ 10.5
PDE8A-209ENST00000558543 SOX10P56693 466 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 TFF2Q03403 129 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 GRM4Q14833 912 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 CLCA4Q14CN2 919 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 TBRG1Q3YBR2 411 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 RBM20Q5T481 1227 aaKnown RBP4.89□□□□□ -1.63
PDE8A-209ENST00000558543 ARHGAP40Q5TG30 622 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 CCDC30Q5VVM6 783 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 ICE2Q659A1 982 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 ATG16L1Q676U5 607 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 ITPRIPL1Q6GPH6 555 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 RGS7BPQ6MZT1 257 aaPredicted RBP4.89□□□□□ -1.63
PDE8A-209ENST00000558543 FASTKD5Q7L8L6 764 aaKnown RBP4.89□□□□□ -1.63
PDE8A-209ENST00000558543 TRABD2AQ86V40 505 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 FSTL5Q8N475 847 aaPredicted RBP4.89□□□□□ -1.63
PDE8A-209ENST00000558543 HMGB4Q8WW32 186 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 ST8SIA4Q92187 359 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 RRP36Q96EU6 259 aaKnown RBP4.89□□□□□ -1.63
PDE8A-209ENST00000558543 CHODLQ9H9P2 273 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 GBA2Q9HCG7 927 aaPredicted RBP4.89□□□□□ -1.63
PDE8A-209ENST00000558543 CLIC5Q9NZA1 410 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 AASSQ9UDR5 926 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 VPS51Q9UID3 782 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 CNTN6Q9UQ52 1028 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 MRPS17Q9Y2R5 130 aaKnown RBP4.89□□□□□ -1.63
PDE8A-209ENST00000558543 SLC45A1Q9Y2W3 748 aa4.89□□□□□ -1.63
PDE8A-209ENST00000558543 GCOM1H8Y6P7 765 aaPredicted RBP4.88□□□□□ -1.63
PDE8A-209ENST00000558543 EXOC5O00471 708 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 ZNF500O60304 480 aaPredicted RBP4.88□□□□□ -1.63
PDE8A-209ENST00000558543 TAF5LO75529 589 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 RTN3O95197 1032 aaPredicted RBP4.88□□□□□ -1.63
PDE8A-209ENST00000558543 ZFXP17010 805 aaPredicted RBP4.88□□□□□ -1.63
PDE8A-209ENST00000558543 RPS6KB1P23443 525 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 UQCRC1P31930 480 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 DEKP35659 375 aaKnown RBP4.88□□□□□ -1.63
PDE8A-209ENST00000558543 CASP6P55212 293 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 SF3A3Q12874 501 aaKnown RBP eCLIP4.88□□□□□ -1.632e-7■■■■■ 49.4
PDE8A-209ENST00000558543 TOMM20Q15388 145 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 TBCCQ15814 346 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 MTX3Q5HYI7 312 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 ZNF569Q5MCW4 686 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 DGAT2L7PQ6IED9 249 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 ACAD10Q6JQN1 1059 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 NEK10Q6ZWH5 1172 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 TMTC2Q8N394 836 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 ADAMTS15Q8TE58 950 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 ATRIPQ8WXE1 791 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 ERP27Q96DN0 273 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 EIF3CQ99613 913 aaKnown RBP4.88□□□□□ -1.63
PDE8A-209ENST00000558543 NUDT16L1Q9BRJ7 211 aaKnown RBP4.88□□□□□ -1.63
PDE8A-209ENST00000558543 REEP2Q9BRK0 252 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 C1QTNF7Q9BXJ2 289 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 AMBRA1Q9C0C7 1298 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 PAIP1Q9H074 479 aaKnown RBP4.88□□□□□ -1.63
PDE8A-209ENST00000558543 SERGEFQ9UGK8 458 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 ASAP1Q9ULH1 1129 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 NAP1L2Q9ULW6 460 aaPredicted RBP4.88□□□□□ -1.63
PDE8A-209ENST00000558543 TTLL3Q9Y4R7 772 aa4.88□□□□□ -1.63
PDE8A-209ENST00000558543 LINC01548A6NM66 108 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 DHHO43323 396 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 GUCY1B2O75343 617 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 RPP40O75818 363 aaKnown RBP4.87□□□□□ -1.63
PDE8A-209ENST00000558543 TMEM63AO94886 807 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 HNRNPA1P09651 372 aaKnown RBP eCLIP4.87□□□□□ -1.63
PDE8A-209ENST00000558543 HGFP14210 728 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 CHMP24386 653 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 PSMC2P35998 433 aaKnown RBP4.87□□□□□ -1.63
PDE8A-209ENST00000558543 DCAF7P61962 342 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 TIAL1Q01085 375 aaKnown RBP eCLIP4.87□□□□□ -1.63
PDE8A-209ENST00000558543 NUCB1Q02818 461 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 P3H1Q32P28 736 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 PTCHD3Q3KNS1 767 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 SUMO4Q6EEV6 95 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 ZNF425Q6IV72 752 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 ARMC8Q8IUR7 673 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 LRRC71Q8N4P6 559 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 SUN3Q8TAQ9 357 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 OSCP1Q8WVF1 389 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 ZUFSPQ96AP4 578 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 WDR24Q96S15 920 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 OSBPL9Q96SU4 736 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 ALG8Q9BVK2 526 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 TRIM36Q9NQ86 728 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 EHD3Q9NZN3 535 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 SH3BP4Q9P0V3 963 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 STEAP1Q9UHE8 339 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 DNAJC16Q9Y2G8 782 aa4.87□□□□□ -1.63
PDE8A-209ENST00000558543 COL15A1P39059 1388 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms