RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 EGFP01133 1207 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 ZDHHC11BP0C7U3 371 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 FAM200BP0CF97 657 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 MBL2P11226 248 aaPredicted RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 USP8P40818 1118 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 DMWDQ09019 674 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 SNX30Q5VWJ9 437 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 LRIG3Q6UXM1 1119 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 ZNF677Q86XU0 584 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 IQCKQ8N0W5 287 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 SYNPOQ8N3V7 929 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 RASGEF1CQ8N431 466 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 RBBP8NLQ8NC74 664 aaPredicted RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 PDZD8Q8NEN9 1154 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 TPCN2Q8NHX9 752 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 EZH1Q92800 747 aaPredicted RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 CYFIP2Q96F07 1278 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 MS4A14Q96JA4 679 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 ZFRQ96KR1 1074 aaKnown RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 PSMB7Q99436 277 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 P2RY13Q9BPV8 354 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 PACSIN1Q9BY11 444 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 CCSER2Q9H7U1 834 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 RRP15Q9Y3B9 282 aaKnown RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 PCDHB4Q9Y5E5 795 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 GVINP1Q7Z2Y8 2422 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 KIAA1549LQ6ZVL6 1849 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 SRRM3A6NNA2 597 aaPredicted RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 PGRMC1O00264 195 aaKnown RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 DDX3XO00571 662 aaKnown RBP eCLIP10.74□□□□□ -0.692e-8■■■■□ 19.9
TPM1-212ENST00000558347 PAPSS2O95340 614 aaPredicted RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 NFATC1O95644 943 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 GLI1P08151 1106 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 PAEPP09466 180 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 KRT5P13647 590 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 CYP11B1P15538 503 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 CHRNB2P17787 502 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 HSPA9P38646 679 aaKnown RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 CDR2Q01850 454 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 GRSF1Q12849 480 aaKnown RBP eCLIP10.74□□□□□ -0.69
TPM1-212ENST00000558347 PPP2R5DQ14738 602 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 PPP2R5EQ16537 467 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 GAB4Q2WGN9 574 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 HECTD3Q5T447 861 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 CFAP58Q5T655 872 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 PPP1R26Q5T8A7 1209 aaPredicted RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 TMEM270Q6UE05 265 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 NOP9Q86U38 636 aaKnown RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 SLC47A2Q86VL8 602 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 DCLK2Q8N568 766 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 SLC4A11Q8NBS3 891 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 TSEN2Q8NCE0 465 aaKnown RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 DDX1Q92499 740 aaKnown RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 AGPAT1Q99943 283 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 CAPS2Q9BXY5 557 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 FAM126AQ9BYI3 521 aaPredicted RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 ISCUQ9H1K1 167 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 EPB41L5Q9HCM4 733 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 COMMD8Q9NX08 183 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 SMARCAL1Q9NZC9 954 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 CFAP97Q9P2B7 532 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 TTC7AQ9ULT0 858 aaPredicted RBP10.74□□□□□ -0.69
TPM1-212ENST00000558347 ATG2BQ96BY7 2078 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 PTPRZ1P23471 2315 aaPredicted RBP10.73□□□□□ -0.69
TPM1-212ENST00000558347 KCNK3O14649 394 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 CYP17A1P05093 508 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 TNFAIP3P21580 790 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 OPRD1P41143 372 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 CARSP49589 748 aaKnown RBP10.73□□□□□ -0.69
TPM1-212ENST00000558347 IRAK1P51617 712 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 RAD23BP54727 409 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 NRLP54845 237 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 GUCY2DQ02846 1103 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 ADGRG2Q8IZP9 1017 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 SLC20A1Q8WUM9 679 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 CASKIN2Q8WXE0 1202 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 CD101Q93033 1021 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 WBP2Q969T9 261 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 TMEM176AQ96HP8 235 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 GDAP1L1Q96MZ0 367 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 ZIM3Q96PE6 472 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 KRT12Q99456 494 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 FBXO44Q9H4M3 255 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 POLR3BQ9NW08 1133 aaPredicted RBP10.73□□□□□ -0.69
TPM1-212ENST00000558347 OSER1Q9NX31 292 aa10.73□□□□□ -0.69
TPM1-212ENST00000558347 FEZ2Q9UHY8 353 aaPredicted RBP10.73□□□□□ -0.69
TPM1-212ENST00000558347 OTOGLQ3ZCN5 2332 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 EP300Q09472 2414 aaPredicted RBP10.72□□□□□ -0.69
TPM1-212ENST00000558347 ANTXRLA6NF34 631 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 HMGB1P1B2RPK0 211 aaPredicted RBP10.72□□□□□ -0.69
TPM1-212ENST00000558347 CHURC1-FNTBB4DL54 471 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 MYO1CO00159 1063 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 EIF3HO15372 352 aaKnown RBP eCLIP10.72□□□□□ -0.69
TPM1-212ENST00000558347 RAD51CO43502 376 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 TBX18O95935 607 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 TMEM253P0C7T8 217 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 GZMAP12544 262 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 DRD1P21728 446 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 GNA15P30679 374 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 NOP2P46087 812 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms