RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 TMEM31Q5JXX7 168 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 FYB2Q5VWT5 728 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 CWF19L1Q69YN2 538 aaKnown RBP26.48■■□□□ 1.83
SMAD6-202ENST00000557916 RFWD3Q6PCD5 774 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 C12orf40Q86WS4 652 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 FAM131BQ86XD5 332 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 DDI1Q8WTU0 396 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 CTNNBL1Q8WYA6 563 aaPredicted RBP26.48■■□□□ 1.83
SMAD6-202ENST00000557916 CD101Q93033 1021 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 ARHGEF26Q96DR7 871 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 TMA16Q96EY4 203 aaKnown RBP26.48■■□□□ 1.83
SMAD6-202ENST00000557916 P2RY11Q96G91 374 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 MTF2Q9Y483 593 aaPredicted RBP26.48■■□□□ 1.83
SMAD6-202ENST00000557916 PRR33A8MZF0 331 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 PENKP01210 267 aaPredicted RBP26.48■■□□□ 1.83
SMAD6-202ENST00000557916 PSMA2P25787 234 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 TARSP26639 723 aaKnown RBP26.48■■□□□ 1.83
SMAD6-202ENST00000557916 SLC6A11P48066 632 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 PIK3R6Q5UE93 754 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 RAP1GAP2Q684P5 730 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 FBXL6Q8N531 539 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 XPO6Q96QU8 1125 aaKnown RBP26.48■■□□□ 1.83
SMAD6-202ENST00000557916 NUP85Q9BW27 656 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 TRIM7Q9C029 511 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 ANLNQ9NQW6 1124 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 SIT1Q9Y3P8 196 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 MYOFQ9NZM1 2061 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 PAGE1O75459 146 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 TACR2P21452 398 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 CYLC1P35663 651 aaPredicted RBP26.47■■□□□ 1.83
SMAD6-202ENST00000557916 EIF2DP41214 584 aaKnown RBP26.47■■□□□ 1.83
SMAD6-202ENST00000557916 HDAC4P56524 1084 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 TMEM196Q5HYL7 178 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 MS4A13Q5J8X5 152 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 CHSY1Q86X52 802 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 ETFBKMTQ8IXQ9 262 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 PJA1Q8NG27 643 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 FNIP1Q8TF40 1166 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 BAG1Q99933 345 aaPredicted RBP26.47■■□□□ 1.83
SMAD6-202ENST00000557916 OSBPL6Q9BZF3 934 aa26.47■■□□□ 1.83
SMAD6-202ENST00000557916 IRX2Q9BZI1 471 aaPredicted RBP26.47■■□□□ 1.83
SMAD6-202ENST00000557916 FBRSL1Q9HCM7 1045 aaKnown RBP26.47■■□□□ 1.83
SMAD6-202ENST00000557916 SOWAHDA6NJG2 315 aa26.46■■□□□ 1.83
SMAD6-202ENST00000557916 CACNG3O60359 315 aa26.46■■□□□ 1.83
SMAD6-202ENST00000557916 TMEM253P0C7T8 217 aa26.46■■□□□ 1.83
SMAD6-202ENST00000557916 MRE11P49959 708 aa26.46■■□□□ 1.83
SMAD6-202ENST00000557916 CLCN5P51795 746 aa26.46■■□□□ 1.83
SMAD6-202ENST00000557916 GSDMDP57764 484 aa26.46■■□□□ 1.83
SMAD6-202ENST00000557916 GRSF1Q12849 480 aaKnown RBP eCLIP26.46■■□□□ 1.83
SMAD6-202ENST00000557916 C10orf76Q5T2E6 689 aa26.46■■□□□ 1.83
SMAD6-202ENST00000557916 ASTLQ6HA08 431 aaPredicted RBP26.46■■□□□ 1.83
SMAD6-202ENST00000557916 ZNF687Q8N1G0 1237 aa26.46■■□□□ 1.83
SMAD6-202ENST00000557916 PRMT1Q99873 361 aaKnown RBP26.46■■□□□ 1.83
SMAD6-202ENST00000557916 DEC1Q9P2X7 70 aa26.46■■□□□ 1.83
SMAD6-202ENST00000557916 HS3ST4Q9Y661 456 aa26.46■■□□□ 1.83
SMAD6-202ENST00000557916 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.45■■□□□ 1.82
SMAD6-202ENST00000557916 I6L893 689 aaPredicted RBP26.45■■□□□ 1.82
SMAD6-202ENST00000557916 TULP3O75386 442 aa26.45■■□□□ 1.82
SMAD6-202ENST00000557916 AOC1P19801 751 aa26.45■■□□□ 1.82
SMAD6-202ENST00000557916 ARL13BQ3SXY8 428 aa26.45■■□□□ 1.82
SMAD6-202ENST00000557916 SUGP1Q8IWZ8 645 aaKnown RBP26.45■■□□□ 1.82
SMAD6-202ENST00000557916 CCDC105Q8IYK2 499 aa26.45■■□□□ 1.82
SMAD6-202ENST00000557916 LGI2Q8N0V4 545 aa26.45■■□□□ 1.82
SMAD6-202ENST00000557916 PNKPQ96T60 521 aa26.45■■□□□ 1.82
SMAD6-202ENST00000557916 SIK2Q9H0K1 926 aa26.45■■□□□ 1.82
SMAD6-202ENST00000557916 TMPRSS4Q9NRS4 437 aa26.45■■□□□ 1.82
SMAD6-202ENST00000557916 DNAJC17Q9NVM6 304 aaKnown RBP26.45■■□□□ 1.82
SMAD6-202ENST00000557916 CTTNBP2NLQ9P2B4 639 aa26.45■■□□□ 1.82
SMAD6-202ENST00000557916 EPN1Q9Y6I3 576 aaPredicted RBP26.45■■□□□ 1.82
SMAD6-202ENST00000557916 F5H5T6 163 aa26.44■■□□□ 1.82
SMAD6-202ENST00000557916 NCAM2O15394 837 aa26.44■■□□□ 1.82
SMAD6-202ENST00000557916 PI15O43692 258 aa26.44■■□□□ 1.82
SMAD6-202ENST00000557916 LCA5LO95447 670 aa26.44■■□□□ 1.82
SMAD6-202ENST00000557916 SGSHP51688 502 aa26.44■■□□□ 1.82
SMAD6-202ENST00000557916 ZNF252P-AS1Q0IIN9 211 aa26.44■■□□□ 1.82
SMAD6-202ENST00000557916 SPA17Q15506 151 aa26.44■■□□□ 1.82
SMAD6-202ENST00000557916 FSTL4Q6MZW2 842 aa26.44■■□□□ 1.82
SMAD6-202ENST00000557916 HJURPQ8NCD3 748 aaPredicted RBP26.44■■□□□ 1.82
SMAD6-202ENST00000557916 MYEOVQ96EZ4 313 aa26.44■■□□□ 1.82
SMAD6-202ENST00000557916 PRICKLE1Q96MT3 831 aaPredicted RBP26.44■■□□□ 1.82
SMAD6-202ENST00000557916 TYW5A2RUC4 315 aaKnown RBP26.43■■□□□ 1.82
SMAD6-202ENST00000557916 EIF3CLB5ME19 914 aaKnown RBP26.43■■□□□ 1.82
SMAD6-202ENST00000557916 TBL1XO60907 577 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 DRD1P21728 446 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 HOXD9P28356 352 aaPredicted RBP26.43■■□□□ 1.82
SMAD6-202ENST00000557916 ADRA1BP35368 520 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 MAGEA1P43355 309 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 KDSRQ06136 332 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 FZD5Q13467 585 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 MPP7Q5T2T1 576 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 SCYL2Q6P3W7 929 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 TMEM139Q8IV31 216 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 HAPLN3Q96S86 360 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 EIF3CQ99613 913 aaKnown RBP26.43■■□□□ 1.82
SMAD6-202ENST00000557916 LMAN1LQ9HAT1 526 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 ARHGEF4Q9NR80 690 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 UVRAGQ9P2Y5 699 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 ANAPC7Q9UJX3 599 aa26.43■■□□□ 1.82
SMAD6-202ENST00000557916 TRIM24O15164 1050 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 NDUFA10O95299 355 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms