RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 KCNT1Q5JUK3 1230 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 IER5LQ5T953 404 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 TMEM25Q86YD3 366 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 PYROXD2Q8N2H3 581 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 ZWILCHQ9H900 591 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 SLC12A6Q9UHW9 1150 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 ZNF510Q9Y2H8 683 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 CAPN6Q9Y6Q1 641 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 SLC9A3R1O14745 358 aaPredicted RBP15.83■□□□□ 0.12
NEDD1-213ENST00000557644 KRT86O43790 486 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 PRPSAP2O60256 369 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 TSPAN3O60637 253 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 COMTP21964 271 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 SGSHP51688 502 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 SLC25A11Q02978 314 aaKnown RBP15.83■□□□□ 0.12
NEDD1-213ENST00000557644 RHBDF2Q6PJF5 856 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 SLFN11Q7Z7L1 901 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 AZIN2Q96A70 460 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 TSGA10Q9BZW7 698 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 MUTYHQ9UIF7 546 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 FZD10Q9ULW2 581 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 ALG6Q9Y672 507 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 GRID2IPA4D2P6 1211 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 USP27XA6NNY8 438 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 MAN1A1P33908 653 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 CA9Q16790 459 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 ARL13BQ3SXY8 428 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 LY6G5CQ5SRR4 150 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 C14orf80Q86SX3 495 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 DAAM2Q86T65 1068 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 CHSY1Q86X52 802 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 FAM217AQ8IXS0 508 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 UHRF1Q96T88 793 aaPredicted RBP15.82■□□□□ 0.12
NEDD1-213ENST00000557644 PRMT1Q99873 361 aaKnown RBP15.82■□□□□ 0.12
NEDD1-213ENST00000557644 SNRNP25Q9BV90 132 aaKnown RBP15.82■□□□□ 0.12
NEDD1-213ENST00000557644 ECT2Q9H8V3 914 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 PLK2Q9NYY3 685 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 NCOR1O75376 2440 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 FAM72CH0Y354 149 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 LATS1O95835 1130 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 CYP17A1P05093 508 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 GJC1P36383 396 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 AUHQ13825 339 aaKnown RBP15.82■□□□□ 0.12
NEDD1-213ENST00000557644 PDGFRLQ15198 375 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 DHCR24Q15392 516 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 ATP13A4Q4VNC1 1196 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 FAM72AQ5TYM5 149 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 FAM72DQ6L9T8 149 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 ZNF662Q6ZS27 426 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 FAM72BQ86X60 149 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 REXO1L1PQ8IX06 675 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 KIAA1958Q8N8K9 716 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 IRF7Q92985 503 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 ATP2A3Q93084 1043 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 NTAN1Q96AB6 310 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 OTUB2Q96DC9 234 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 PRICKLE1Q96MT3 831 aaPredicted RBP15.82■□□□□ 0.12
NEDD1-213ENST00000557644 HAPLN3Q96S86 360 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 IRX2Q9BZI1 471 aaPredicted RBP15.82■□□□□ 0.12
NEDD1-213ENST00000557644 SPHK2Q9NRA0 654 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 VANGL2Q9ULK5 521 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 SORCS3Q9UPU3 1222 aa15.82■□□□□ 0.12
NEDD1-213ENST00000557644 BDP1A6H8Y1 2624 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 KIF26AQ9ULI4 1882 aaPredicted RBP15.81■□□□□ 0.12
NEDD1-213ENST00000557644 GFRA2O00451 464 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 PALMO75781 387 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 TNNT1P13805 278 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 TACR2P21452 398 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 CHKAP35790 457 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 MLLT6P55198 1093 aaPredicted RBP15.81■□□□□ 0.12
NEDD1-213ENST00000557644 RUNX3Q13761 415 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 ARTNQ5T4W7 220 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 LGI2Q8N0V4 545 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 CFAP52Q8N1V2 620 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 LRRC57Q8N9N7 239 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 OR12D3Q9UGF7 316 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 DUSP12Q9UNI6 340 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 AP4E1Q9UPM8 1137 aa15.81■□□□□ 0.12
NEDD1-213ENST00000557644 SRFP11831 508 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 SOX9P48436 509 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 IRAK1P51617 712 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 RPS24P62847 133 aaKnown RBP15.8■□□□□ 0.12
NEDD1-213ENST00000557644 SCAPQ12770 1279 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 ANO4Q32M45 955 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 ERMARDQ5T6L9 678 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 C11orf63Q6NUN7 778 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 FBXL22Q6P050 247 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 CPXM2Q8N436 756 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 HSPH1Q92598 858 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 IGSF8Q969P0 613 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 KLHL11Q9NVR0 708 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 TMEM51Q9NW97 253 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 LCMT1Q9UIC8 334 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 MYOFQ9NZM1 2061 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 SPOPO43791 374 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 SRGAP2O75044 1071 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 NFATC1O95644 943 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 RARAP10276 462 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 EFHC2Q5JST6 749 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 NAIF1Q69YI7 327 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms