RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SEPT11Q9NVA2 429 aaKnown RBP12.98□□□□□ -0.33
SLIRP-211ENST00000557623 FAM86C1Q9NVL1 165 aa12.98□□□□□ -0.33
SLIRP-211ENST00000557623 DDIT4Q9NX09 232 aa12.98□□□□□ -0.33
SLIRP-211ENST00000557623 ZSCAN32Q9NX65 697 aa12.98□□□□□ -0.33
SLIRP-211ENST00000557623 PLK2Q9NYY3 685 aa12.98□□□□□ -0.33
SLIRP-211ENST00000557623 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.98□□□□□ -0.33
SLIRP-211ENST00000557623 AIPL1Q9NZN9 384 aa12.98□□□□□ -0.33
SLIRP-211ENST00000557623 FBXO10Q9UK96 956 aa12.98□□□□□ -0.33
SLIRP-211ENST00000557623 PCDHGA2Q9Y5H1 932 aa12.98□□□□□ -0.33
SLIRP-211ENST00000557623 A0A1W2PQJ5 194 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 TYW5A2RUC4 315 aaKnown RBP12.97□□□□□ -0.33
SLIRP-211ENST00000557623 LRRC53A6NM62 1247 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 CBFA2T2O43439 604 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 TNFAIP3P21580 790 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 HOXA6P31267 233 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 CCR1P32246 355 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 PBX1P40424 430 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 SEC13P55735 322 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 RNASE9P60153 205 aaKnown RBP12.97□□□□□ -0.33
SLIRP-211ENST00000557623 EIF4EBP2Q13542 120 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-211ENST00000557623 E2F5Q15329 346 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 CLEC16AQ2KHT3 1053 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 C2orf27AQ580R0 203 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 ZC3H12AQ5D1E8 599 aaKnown RBP12.97□□□□□ -0.33
SLIRP-211ENST00000557623 C10orf76Q5T2E6 689 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 MPP7Q5T2T1 576 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 TSSK4Q6SA08 328 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 ARCQ7LC44 396 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 TRMT11Q7Z4G4 463 aaKnown RBP12.97□□□□□ -0.33
SLIRP-211ENST00000557623 PHF13Q86YI8 300 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-211ENST00000557623 CAMKK1Q8N5S9 505 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 ZNF557Q8N988 423 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-211ENST00000557623 ATRIPQ8WXE1 791 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 NELL1Q92832 810 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 RNF34Q969K3 372 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 BTN2A3PQ96KV6 586 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 PCDHB18PQ96TA0 734 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 TTYH3Q9C0H2 523 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 IFNKQ9P0W0 207 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 SLC27A6Q9Y2P4 619 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 STARD13Q9Y3M8 1113 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 PAXBP1Q9Y5B6 917 aa12.97□□□□□ -0.33
SLIRP-211ENST00000557623 PROB1E7EW31 1015 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 GOLGA8SH3BPF8 625 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 K7ESF4 209 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 M0QYT0 321 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 GFRA2O00451 464 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 TSPAN3O60637 253 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 MOCS2O96007 188 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-211ENST00000557623 F9P00740 461 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 CALB1P05937 261 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 CISD3P0C7P0 127 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 TDGF1P13385 188 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 ABCB4P21439 1286 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 KIR2DL1P43626 348 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-211ENST00000557623 GSCP56915 257 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-211ENST00000557623 FAM133BQ5BKY9 247 aaKnown RBP12.96□□□□□ -0.33
SLIRP-211ENST00000557623 EOGTQ5NDL2 527 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 PIK3R6Q5UE93 754 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 PKN3Q6P5Z2 889 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 MMS22LQ6ZRQ5 1243 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 SND1Q7KZF4 910 aaKnown RBP eCLIP12.96□□□□□ -0.331e-12■■□□□ 11.5
SLIRP-211ENST00000557623 HJURPQ8NCD3 748 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-211ENST00000557623 SLC30A5Q8TAD4 765 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 PGAP3Q96FM1 320 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-211ENST00000557623 NPY6RQ99463 290 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 C11orf70Q9BRQ4 267 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 ADAM22Q9P0K1 906 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 MMP17Q9ULZ9 603 aa12.96□□□□□ -0.33
SLIRP-211ENST00000557623 EML5Q05BV3 1969 aa12.96□□□□□ -0.34
SLIRP-211ENST00000557623 MUC6Q6W4X9 2439 aa12.96□□□□□ -0.34
SLIRP-211ENST00000557623 ITIH6Q6UXX5 1313 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 SYNJ2BP-COX16A0A087WUM0 186 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 CCDC163A0A0D9SF12 145 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 GOLGA6L7A0A1B0GV03 622 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 KCNU1A8MYU2 1149 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 HOXD9P28356 352 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-211ENST00000557623 SLC6A4P31645 630 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 PRKCIP41743 596 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 SULT1E1P49888 294 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 PITX1P78337 314 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-211ENST00000557623 KLHL30Q0D2K2 578 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 MESP2Q0VG99 397 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 NME3Q13232 169 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 DMC1Q14565 340 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 SLC25A52Q3SY17 297 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 C2CD6Q53TS8 623 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 MS4A13Q5J8X5 152 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 BRMS1LQ5PSV4 323 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 NADSYN1Q6IA69 706 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 SDE2Q6IQ49 451 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 ACAD10Q6JQN1 1059 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 ANKS1BQ7Z6G8 1248 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 LONP2Q86WA8 852 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-211ENST00000557623 ZNF513Q8N8E2 541 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-211ENST00000557623 ZBTB44Q8NCP5 570 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 UCMAQ8WVF2 138 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 SYN2Q92777 582 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-211ENST00000557623 NKD2Q969F2 451 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms