RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SHOC2Q9UQ13 582 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 MEI4A8MW99 385 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 FAM220BPB1ANY3 271 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 GLUD1P00367 558 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 ENO3P13929 434 aaPredicted RBP8.56□□□□□ -1.04
CHD8-213ENST00000557364 CYP2F1P24903 491 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 CD151P48509 253 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 CHRNB3Q05901 458 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 C1DQ13901 141 aaKnown RBP8.56□□□□□ -1.04
CHD8-213ENST00000557364 SYCP2LQ5T4T6 812 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 RXFP2Q8WXD0 754 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 PCDH9Q9HC56 1237 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 KPNA3O00505 521 aaPredicted RBP8.56□□□□□ -1.04
CHD8-213ENST00000557364 FTH1P02794 183 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 PCNAP12004 261 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 NOS2P35228 1153 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 GPD2P43304 727 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 RARRES1P49788 294 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 DYNC1I2Q13409 638 aaKnown RBP8.56□□□□□ -1.04
CHD8-213ENST00000557364 AP1ARQ63HQ0 302 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 RBM43Q6ZSC3 357 aaKnown RBP8.56□□□□□ -1.04
CHD8-213ENST00000557364 ZNF507Q8TCN5 953 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 BHMTQ93088 406 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 PNKPQ96T60 521 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 ADI1Q9BV57 179 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 PARVBQ9HBI1 364 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 ZC4H2Q9NQZ6 224 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 CHORDC1Q9UHD1 332 aaPredicted RBP8.56□□□□□ -1.04
CHD8-213ENST00000557364 FAM153AQ9UHL3 310 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 CACNB4O00305 520 aaPredicted RBP8.56□□□□□ -1.04
CHD8-213ENST00000557364 ALBP02768 609 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 MMP13P45452 471 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 TEAD4Q15561 434 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 ATAT1Q5SQI0 421 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 SEL1L3Q68CR1 1132 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 GLT6D1Q7Z4J2 308 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 CELF4Q9BZC1 486 aaKnown RBP8.56□□□□□ -1.04
CHD8-213ENST00000557364 ATAD3AQ9NVI7 634 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 GNPTGQ9UJJ9 305 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 C15orf38-AP3S2A0A0A6YYH1 394 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 AMD1P17707 334 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 WEE1P30291 646 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 ARPINQ7Z6K5 226 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 SRLQ86TD4 932 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 LRRC39Q96DD0 335 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 FAIM2Q9BWQ8 316 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 GPAMQ9HCL2 828 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
CHD8-213ENST00000557364 LRRC4BQ9NT99 713 aa8.56□□□□□ -1.04
CHD8-213ENST00000557364 GPN3Q9UHW5 284 aaPredicted RBP8.56□□□□□ -1.04
CHD8-213ENST00000557364 LRRC14BA6NHZ5 514 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 CCDC85CA6NKD9 419 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 LSP1P33241 339 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 NDST1P52848 882 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 COPAP53621 1224 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 SLC6A3Q01959 620 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 COLGALT2Q8IYK4 626 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 SPATA5L1Q9BVQ7 753 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 MRTO4Q9UKD2 239 aaKnown RBP8.55□□□□□ -1.04
CHD8-213ENST00000557364 CORO2BQ9UQ03 480 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 SLIT3O75094 1523 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 AFDNP55196 1824 aaKnown RBP8.55□□□□□ -1.04
CHD8-213ENST00000557364 SLC39A12Q504Y0 691 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 PALB2Q86YC2 1186 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 CENPLQ8N0S6 344 aaPredicted RBP8.55□□□□□ -1.04
CHD8-213ENST00000557364 OR8D1Q8WZ84 308 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 TIFAQ96CG3 184 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 FICDQ9BVA6 458 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 MRPS33Q9Y291 106 aaKnown RBP8.55□□□□□ -1.04
CHD8-213ENST00000557364 F8VZ95 297 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 RECQL4O94761 1208 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 JCHAINP01591 159 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 HTR7P34969 479 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 CDK7P50613 346 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 CYP20A1Q6UW02 462 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 OR56A4Q8NGH8 313 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 USP7Q93009 1102 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 RERGQ96A58 199 aaPredicted RBP8.55□□□□□ -1.04
CHD8-213ENST00000557364 SENP8Q96LD8 212 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 EPN3Q9H201 632 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 SMIM35A0A1B0GVV1 85 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 ALDH6A1Q02252 535 aaKnown RBP8.55□□□□□ -1.04
CHD8-213ENST00000557364 SERPINA13PQ6UXR4 307 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 LGI2Q8N0V4 545 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 RFWD2Q8NHY2 731 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 AGR3Q8TD06 166 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 CES2O00748 559 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 NTSP30990 170 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 CDR2LQ86X02 465 aaPredicted RBP8.55□□□□□ -1.04
CHD8-213ENST00000557364 KRT73Q86Y46 540 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 LRRC52Q8N7C0 313 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 BBS4Q96RK4 519 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 A1CFQ9NQ94 594 aaKnown RBP8.55□□□□□ -1.04
CHD8-213ENST00000557364 ZNF232Q9UNY5 417 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 A0A087X1B8 175 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 FOXN3O00409 490 aaPredicted RBP8.55□□□□□ -1.04
CHD8-213ENST00000557364 NFATC1O95644 943 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 SMIM10L2AP0DMW4 78 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 SMIM10L2BP0DMW5 78 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 COX7A2P14406 83 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms