RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 GFRA2O00451 464 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 SLC6A4P31645 630 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 RFC1P35251 1148 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-228ENST00000557302 EIF4A3P38919 411 aaKnown RBP14.09□□□□□ -0.15
SHMT2-228ENST00000557302 PTPN9P43378 593 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 DGKGP49619 791 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 CXCR3P49682 368 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 ADKP55263 362 aaKnown RBP14.09□□□□□ -0.15
SHMT2-228ENST00000557302 ATP11AP98196 1134 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 MTAPQ13126 283 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 TBX2Q13207 712 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-228ENST00000557302 ARID5BQ14865 1188 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 BRMS1LQ5PSV4 323 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 PIK3R6Q5UE93 754 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 RFWD3Q6PCD5 774 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 DCUN1D2Q6PH85 259 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 Q6ZS52 159 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 NUDT18Q6ZVK8 323 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 CHSY1Q86X52 802 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 PHTF2Q8N3S3 785 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 HJURPQ8NCD3 748 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-228ENST00000557302 EZH1Q92800 747 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-228ENST00000557302 TRIM11Q96F44 468 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 P2RY11Q96G91 374 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 ADAM33Q9BZ11 813 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 KCNH6Q9H252 994 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 ABHD10Q9NUJ1 306 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 PARVAQ9NVD7 372 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 CALCOCO1Q9P1Z2 691 aa14.09□□□□□ -0.15
SHMT2-228ENST00000557302 XPO7Q9UIA9 1087 aaKnown RBP14.09□□□□□ -0.15
SHMT2-228ENST00000557302 MYOFQ9NZM1 2061 aa14.08□□□□□ -0.15
SHMT2-228ENST00000557302 TBC1D3BA6NDS4 549 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 TRIM24O15164 1050 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 ATMINO43313 823 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-228ENST00000557302 RNF40O75150 1001 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 MYBL1P10243 752 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 TACR2P21452 398 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 GPD1P21695 349 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 RDXP35241 583 aaKnown RBP14.08□□□□□ -0.16
SHMT2-228ENST00000557302 MESP2Q0VG99 397 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 CDO1Q16878 200 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 CCDC14Q49A88 953 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 MS4A13Q5J8X5 152 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 PPP1R15BQ5SWA1 713 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 MPP7Q5T2T1 576 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 RAP1GAP2Q684P5 730 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 PLEKHA7Q6IQ23 1121 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 WDR59Q6PJI9 974 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 BNIPLQ7Z465 357 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 DNAAF5Q86Y56 855 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 C1orf210Q8IVY1 113 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 LGI2Q8N0V4 545 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 SPEM1Q8N4L4 309 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 TERB1Q8NA31 727 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 ZNF653Q96CK0 615 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 MCEEQ96PE7 176 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 ISCUQ9H1K1 167 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 DEF6Q9H4E7 631 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 WDCPQ9H6R7 721 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 FBXO10Q9UK96 956 aa14.08□□□□□ -0.16
SHMT2-228ENST00000557302 CACNA1HO95180 2353 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 A0A087X0T9 212 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 A0A0A0MRY4 1105 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 F5H5T6 163 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 K7EQS6 105 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 LAMTOR5O43504 91 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 TBL1XO60907 577 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 ATG13O75143 517 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 PAGE1O75459 146 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 ENDOD1O94919 500 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 ADCY5O95622 1261 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 FAM228BP0C875 321 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 DESP17661 470 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 HOXD9P28356 352 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-228ENST00000557302 TNFRSF4P43489 277 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 SGSHP51688 502 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 ATXN1P54253 815 aaKnown RBP14.07□□□□□ -0.16
SHMT2-228ENST00000557302 SEC13P55735 322 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 RPL7AP62424 266 aaKnown RBP14.07□□□□□ -0.16
SHMT2-228ENST00000557302 MAMLD1Q13495 774 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 GAS6Q14393 721 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 C15orf59Q2T9L4 293 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-228ENST00000557302 CCDC122Q5T0U0 273 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 C10orf76Q5T2E6 689 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 ALKBH5Q6P6C2 394 aaKnown RBP14.07□□□□□ -0.16
SHMT2-228ENST00000557302 MAMSTRQ6ZN01 415 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 STRADAQ7RTN6 431 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 PRICKLE1Q96MT3 831 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-228ENST00000557302 PRMT1Q99873 361 aaKnown RBP14.07□□□□□ -0.16
SHMT2-228ENST00000557302 SLC2A11Q9BYW1 496 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 TKTL2Q9H0I9 626 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 ARHGEF38Q9NXL2 777 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 CNOT8Q9UFF9 292 aaKnown RBP14.07□□□□□ -0.16
SHMT2-228ENST00000557302 SLC27A6Q9Y2P4 619 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 SCINQ9Y6U3 715 aa14.07□□□□□ -0.16
SHMT2-228ENST00000557302 PIEZO1Q92508 2521 aa14.06□□□□□ -0.16
SHMT2-228ENST00000557302 SSU72P8A0A1W2PR75 194 aa14.06□□□□□ -0.16
SHMT2-228ENST00000557302 AKR1B10O60218 316 aa14.06□□□□□ -0.16
SHMT2-228ENST00000557302 CISD3P0C7P0 127 aa14.06□□□□□ -0.16
SHMT2-228ENST00000557302 CCR3P51677 355 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms