RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 TRIM7Q9C029 511 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 TKTL2Q9H0I9 626 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 FBRSL1Q9HCM7 1045 aaKnown RBP18.14■□□□□ 0.49
SHMT2-225ENST00000556798 TMPRSS4Q9NRS4 437 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 MRPS17Q9Y2R5 130 aaKnown RBP18.14■□□□□ 0.49
SHMT2-225ENST00000556798 I6L893 689 aaPredicted RBP18.13■□□□□ 0.49
SHMT2-225ENST00000556798 TRIM24O15164 1050 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 F9P00740 461 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 SLC2A3P11169 496 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 AOC1P19801 751 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 ZNF143P52747 638 aaPredicted RBP18.13■□□□□ 0.49
SHMT2-225ENST00000556798 MESP2Q0VG99 397 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 PIK3R6Q5UE93 754 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 ASTLQ6HA08 431 aaPredicted RBP18.13■□□□□ 0.49
SHMT2-225ENST00000556798 FSTL4Q6MZW2 842 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 C1orf228Q6PIY5 440 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 SUGP1Q8IWZ8 645 aaKnown RBP18.13■□□□□ 0.49
SHMT2-225ENST00000556798 ETFBKMTQ8IXQ9 262 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 ZNF687Q8N1G0 1237 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 TMEM105Q8N8V8 129 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 PANX2Q96RD6 677 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 WDCPQ9H6R7 721 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 RBM12Q9NTZ6 932 aaKnown RBP18.13■□□□□ 0.49
SHMT2-225ENST00000556798 ARHGEF38Q9NXL2 777 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 SIT1Q9Y3P8 196 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 SNX10Q9Y5X0 201 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 SCINQ9Y6U3 715 aa18.13■□□□□ 0.49
SHMT2-225ENST00000556798 MYO18AQ92614 2054 aaKnown RBP18.13■□□□□ 0.49
SHMT2-225ENST00000556798 GFRA2O00451 464 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 CACNG3O60359 315 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 TULP3O75386 442 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 PAGE1O75459 146 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 ENDOD1O94919 500 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 EGFP01133 1207 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 PENKP01210 267 aaPredicted RBP18.12■□□□□ 0.49
SHMT2-225ENST00000556798 CYBBP04839 570 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 TACR2P21452 398 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 PSMA2P25787 234 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 HDAC4P56524 1084 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 ZNF252P-AS1Q0IIN9 211 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 TMEM196Q5HYL7 178 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 MS4A13Q5J8X5 152 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 BRMS1LQ5PSV4 323 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 STRADAQ7RTN6 431 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 SFTPA1Q8IWL2 248 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 LGI2Q8N0V4 545 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 NUP85Q9BW27 656 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 DNAJC17Q9NVM6 304 aaKnown RBP18.12■□□□□ 0.49
SHMT2-225ENST00000556798 IMPACTQ9P2X3 320 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 SLC12A6Q9UHW9 1150 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 CLEC4EQ9ULY5 219 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 HS3ST4Q9Y661 456 aa18.12■□□□□ 0.49
SHMT2-225ENST00000556798 TMEM191CA6NGB0 347 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 SOWAHDA6NJG2 315 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 TBL1XO60907 577 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 CYP1A2P05177 515 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 H2AFZP0C0S5 128 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 CHRNB1P11230 501 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 HOXD9P28356 352 aaPredicted RBP18.11■□□□□ 0.49
SHMT2-225ENST00000556798 CLCN5P51795 746 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 RPS24P62847 133 aaKnown RBP18.11■□□□□ 0.49
SHMT2-225ENST00000556798 GRSF1Q12849 480 aaKnown RBP eCLIP18.11■□□□□ 0.49
SHMT2-225ENST00000556798 FZD5Q13467 585 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 MPPE1Q53F39 396 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 H2AFVQ71UI9 128 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 CFAP52Q8N1V2 620 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 CENPIQ92674 756 aaPredicted RBP18.11■□□□□ 0.49
SHMT2-225ENST00000556798 EZH1Q92800 747 aaPredicted RBP18.11■□□□□ 0.49
SHMT2-225ENST00000556798 TMA16Q96EY4 203 aaKnown RBP18.11■□□□□ 0.49
SHMT2-225ENST00000556798 XPO6Q96QU8 1125 aaKnown RBP18.11■□□□□ 0.49
SHMT2-225ENST00000556798 PNKPQ96T60 521 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 NELL2Q99435 816 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 PRMT1Q99873 361 aaKnown RBP18.11■□□□□ 0.49
SHMT2-225ENST00000556798 DDX50Q9BQ39 737 aaKnown RBP18.11■□□□□ 0.49
SHMT2-225ENST00000556798 CNPY3Q9BT09 278 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 SIK2Q9H0K1 926 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 LMAN1LQ9HAT1 526 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 MRPL47Q9HD33 250 aaKnown RBP18.11■□□□□ 0.49
SHMT2-225ENST00000556798 ARHGEF4Q9NR80 690 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 STIM2Q9P246 746 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 PAXBP1Q9Y5B6 917 aa18.11■□□□□ 0.49
SHMT2-225ENST00000556798 ANTXRLA6NF34 631 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 F5H5T6 163 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 FECHP22830 423 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 EIF2DP41214 584 aaKnown RBP18.1■□□□□ 0.49
SHMT2-225ENST00000556798 CCINQ13939 588 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 GRAMD4Q6IC98 578 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 PHTF2Q8N3S3 785 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 CCDC185Q8N715 623 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 HJURPQ8NCD3 748 aaPredicted RBP18.1■□□□□ 0.49
SHMT2-225ENST00000556798 CTNNBL1Q8WYA6 563 aaPredicted RBP18.1■□□□□ 0.49
SHMT2-225ENST00000556798 BTBD6Q96KE9 485 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 OSBPL6Q9BZF3 934 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 DEC1Q9P2X7 70 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 VANGL2Q9ULK5 521 aa18.1■□□□□ 0.49
SHMT2-225ENST00000556798 GOLGA6L6A8MZA4 724 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.09■□□□□ 0.49
SHMT2-225ENST00000556798 KAT7O95251 611 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 DRD1P21728 446 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 DGKGP49619 791 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms