RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 MARCH8Q5T0T0 291 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 PLA2G4FQ68DD2 849 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 FAM173BQ6P4H8 233 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 PSRC1Q6PGN9 363 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-243ENST00000556671 LRRC55Q6ZSA7 311 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 TMCO2Q7Z6W1 182 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-243ENST00000556671 SESTD1Q86VW0 696 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 RHPN2Q8IUC4 686 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 NME8Q8N427 588 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 GLB1L3Q8NCI6 653 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-243ENST00000556671 DBF4BQ8NFT6 615 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 OR52N2Q8NGI0 321 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 ETNPPLQ8TBG4 499 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 CPT1CQ8TCG5 803 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 PIGOQ8TEQ8 1089 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 SEPT8Q92599 483 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 TMEM143Q96AN5 459 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 ZG16BQ96DA0 208 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 CDK5RAP3Q96JB5 506 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 MAP7D2Q96T17 732 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 MLST8Q9BVC4 326 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 TARS2Q9BW92 718 aaKnown RBP5.16□□□□□ -1.58
ATXN3-243ENST00000556671 LSM14BQ9BX40 385 aaKnown RBP5.16□□□□□ -1.58
ATXN3-243ENST00000556671 CPEB1Q9BZB8 566 aaKnown RBP5.16□□□□□ -1.58
ATXN3-243ENST00000556671 RAB34Q9BZG1 259 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 MS4A5Q9H3V2 200 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 CERS4Q9HA82 394 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 POLD4Q9HCU8 107 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 SUCLA2Q9P2R7 463 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-243ENST00000556671 LRWD1Q9UFC0 647 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 TMPRSS11EQ9UL52 423 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-243ENST00000556671 HS3ST4Q9Y661 456 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 NUMBLQ9Y6R0 609 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 BRCA2P51587 3418 aa5.16□□□□□ -1.58
ATXN3-243ENST00000556671 RALGAPA2Q2PPJ7 1873 aa5.15□□□□□ -1.58
ATXN3-243ENST00000556671 MYH10P35580 1976 aa5.15□□□□□ -1.58
ATXN3-243ENST00000556671 IGKV6D-21A0A0A0MT36 114 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 SMIM35A0A1B0GVV1 85 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 DENND3A2RUS2 1198 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 STX6O43752 255 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 NBNO60934 754 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 CSDE1O75534 798 aaKnown RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 RPS6KA5O75582 802 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 RECQL4O94761 1208 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 SLITRK3O94933 977 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 PARNO95453 639 aaKnown RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 MYOGP15173 224 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 NCLP19338 710 aaKnown RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 FGFR4P22455 802 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 PROZP22891 400 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 XPAP23025 273 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 ZFP36P26651 326 aaKnown RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 MARCKSP29966 332 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 CDC25AP30304 524 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 CD52P31358 61 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 YWHABP31946 246 aaKnown RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 TOB1P50616 345 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 SCNN1BP51168 640 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 PPP2R5CQ13362 524 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 CUL4AQ13619 759 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 LONRF3Q496Y0 759 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 RILPL1Q5EBL4 403 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 LY6G5CQ5SRR4 150 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 SPOUT1Q5T280 376 aaKnown RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 MBNL2Q5VZF2 373 aaKnown RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 KRT79Q5XKE5 535 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 TAF2Q6P1X5 1199 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 Q7L0L9 218 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 DOK3Q7L591 496 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 KIAA0319LQ8IZA0 1049 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 MYOCDQ8IZQ8 938 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 AHI1Q8N157 1196 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 DEFB123Q8N688 67 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 RNF169Q8NCN4 708 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 RDM1Q8NG50 284 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 PROKR1Q8TCW9 393 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 PPM1EQ8WY54 764 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 HERVK_113Q902F9 699 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 SNX21Q969T3 373 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 NLRP4Q96MN2 994 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 MBOAT7Q96N66 472 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 CTAGE1Q96RT6 745 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 LXNQ9BS40 222 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 IFIH1Q9BYX4 1025 aaKnown RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 PANK2Q9BZ23 570 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 EPC1Q9H2F5 836 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 SLC28A3Q9HAS3 691 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 KCNMB3Q9NPA1 279 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 TRPV2Q9Y5S1 764 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 PLXNA4Q9HCM2 1894 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 MKI67P46013 3256 aaKnown RBP5.15□□□□□ -1.59
ATXN3-243ENST00000556671 COL1A2P08123 1366 aa5.15□□□□□ -1.59
ATXN3-243ENST00000556671 MYO7AQ13402 2215 aa5.14□□□□□ -1.59
ATXN3-243ENST00000556671 A0A087WZ62 844 aa5.14□□□□□ -1.59
ATXN3-243ENST00000556671 ABHD14A-ACY1A0A1B0GW23 586 aa5.14□□□□□ -1.59
ATXN3-243ENST00000556671 A0A1W2PPC1 479 aa5.14□□□□□ -1.59
ATXN3-243ENST00000556671 ARHGEF35A5YM69 484 aa5.14□□□□□ -1.59
ATXN3-243ENST00000556671 ANKRD62A6NC57 917 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms