RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 MUTYHQ9UIF7 546 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 SORCS3Q9UPU3 1222 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 HS3ST4Q9Y661 456 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 ZSCAN12O43309 604 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 SRGAP2O75044 1071 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 LATS1O95835 1130 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 TACR2P21452 398 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 COMTP21964 271 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 SLC6A4P31645 630 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 MAN1A1P33908 653 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 PCK1P35558 622 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 RUNX3Q13761 415 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 HADHQ16836 314 aaKnown RBP14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 FAM133BQ5BKY9 247 aaKnown RBP14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 LY6G5CQ5SRR4 150 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 PIK3R6Q5UE93 754 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 TMEM25Q86YD3 366 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 ADGRG2Q8IZP9 1017 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 LGI2Q8N0V4 545 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 DDI1Q8WTU0 396 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 HSPH1Q92598 858 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 NCAPGQ9BPX3 1015 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 MAGEB5Q9BZ81 275 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 HPS4Q9NQG7 708 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 SPHK2Q9NRA0 654 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 PLK2Q9NYY3 685 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 VANGL2Q9ULK5 521 aa14.54□□□□□ -0.08
VIPAS39-208ENST00000556412 NEDD8-MDP1E9PL57 170 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 F5H5T6 163 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 ADH1CP00326 375 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 CYBBP04839 570 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 CYP17A1P05093 508 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 SRFP11831 508 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 IL1R2P27930 398 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 HADHBP55084 474 aaKnown RBP14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 MTA1Q13330 715 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 AUHQ13825 339 aaKnown RBP14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 DHCR24Q15392 516 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 CFAP52Q8N1V2 620 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 PYROXD2Q8N2H3 581 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 KIAA1958Q8N8K9 716 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 AZIN2Q96A70 460 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 NTAN1Q96AB6 310 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 TRIM44Q96DX7 344 aaPredicted RBP14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 RPRD1AQ96P16 312 aaPredicted RBP14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 HAPLN3Q96S86 360 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 SNRNP25Q9BV90 132 aaKnown RBP14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 BBS2Q9BXC9 721 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 DHX35Q9H5Z1 703 aaKnown RBP14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 ECT2Q9H8V3 914 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 STIM2Q9P246 746 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 FZD10Q9ULW2 581 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 DUSP12Q9UNI6 340 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 AP4E1Q9UPM8 1137 aa14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 ZNF638Q14966 1978 aaKnown RBP14.53□□□□□ -0.08
VIPAS39-208ENST00000556412 OTOL1A6NHN0 477 aaPredicted RBP14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 PALMO75781 387 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 ADH5P11766 374 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 SOX9P48436 509 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 TAS2R40P59535 323 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 PFKPQ01813 784 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 NR1H3Q13133 447 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 ITPRIPL2Q3MIP1 535 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 ERMARDQ5T6L9 678 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 TXNRD3NBQ6F5E7 133 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 C11orf63Q6NUN7 778 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 RHBDF2Q6PJF5 856 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 LRRC31Q6UY01 552 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 TMA16Q96EY4 203 aaKnown RBP14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 HEBP1Q9NRV9 189 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 KLHL11Q9NVR0 708 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 OR12D3Q9UGF7 316 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 STOML2Q9UJZ1 356 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 ALG6Q9Y672 507 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 CAPN6Q9Y6Q1 641 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 OBSL1O75147 1896 aa14.52□□□□□ -0.08
VIPAS39-208ENST00000556412 TYW5A2RUC4 315 aaKnown RBP14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 GRID2IPA4D2P6 1211 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 ARNTLO00327 626 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 CREB3O43889 395 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 SLC1A1P43005 524 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 SGSHP51688 502 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 MLLT6P55198 1093 aaPredicted RBP14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 SLC25A11Q02978 314 aaKnown RBP14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 CA9Q16790 459 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 MPPE1Q53F39 396 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 PPP6R3Q5H9R7 873 aaPredicted RBP14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 RWDD4Q6NW29 188 aaKnown RBP14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 FBXL22Q6P050 247 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 C14orf80Q86SX3 495 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 CIR1Q86X95 450 aaPredicted RBP14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 CPXM2Q8N436 756 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 NAT16Q8N8M0 369 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 KIAA1524Q8TCG1 905 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 MYEOVQ96EZ4 313 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 CALR3Q96L12 384 aaKnown RBP14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 PRICKLE1Q96MT3 831 aaPredicted RBP14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 FBXL21Q9UKT6 434 aa14.52□□□□□ -0.09
VIPAS39-208ENST00000556412 E9PAM4 449 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms