RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	TMEM120A	Q9BXJ8	343 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	NKX1-2	Q9UD57	310 aa	Predicted RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	MTO1	Q9Y2Z2	717 aa	Known RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	TCRBV7S3A2	A0A539	114 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	APOC4-APOC2	K7ER74	178 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	APOC2	P02655	101 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	EDN1	P05305	212 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	PTPN7	P35236	360 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	DYNC1I2	Q13409	638 aa	Known RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	KBTBD12	Q3ZCT8	623 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	SGO1	Q5FBB7	561 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	WASHC2D	Q5SRD0	308 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	NMD3	Q96D46	503 aa	Known RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	PABPC5	Q96DU9	382 aa	Known RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	ACO2	Q99798	780 aa	Known RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	RNPEP	Q9H4A4	650 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	PRDM5	Q9NQX1	630 aa	Predicted RBP	12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	PGAP2	Q9UHJ9	254 aa		12.63	□□□□□ -0.39
TMPO-212	ENST00000556029	HMBS	P08397	361 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	CPT1A	P50416	773 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	NME5	P56597	212 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	NBPF20	Q3BBV1	942 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	CLNK	Q7Z7G1	428 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	WDTC1	Q8N5D0	677 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	TNIP3	Q96KP6	325 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	NIFK	Q9BYG3	293 aa	Known RBP	12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	SAR1A	Q9NR31	198 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	STRN	O43815	780 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	TMEM63A	O94886	807 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	PARN	O95453	639 aa	Known RBP	12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	NFIC	P08651	508 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	PAM	P19021	973 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	IL10	P22301	178 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	STIP1	P31948	543 aa	Known RBP	12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	NRL	P54845	237 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	DMC1	Q14565	340 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	TAF5	Q15542	800 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	NIPA2	Q8N8Q9	360 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	NAT8L	Q8N9F0	302 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	CNBD2	Q96M20	576 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	CCT7	Q99832	543 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	APOL2	Q9BQE5	337 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	PTPRH	Q9HD43	1115 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	PCDHGC3	Q9UN70	934 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	GLTPD2	A6NH11	291 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	TSPAN3	O60637	253 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	SLC26A2	P50443	739 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	TSPY1	Q01534	308 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	TRIM60	Q495X7	471 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	SPDYA	Q5MJ70	313 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	FAM182A	Q5T1J6	154 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	GPR142	Q7Z601	462 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	MAB21L3	Q8N8X9	362 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	BHMT	Q93088	406 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	UTP4	Q969X6	686 aa	Known RBP	12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	CPXM1	Q96SM3	734 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	TXNRD2	Q9NNW7	524 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	SSU72	Q9NP77	194 aa	Known RBP	12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	STAP1	Q9ULZ2	295 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	EFR3B	Q9Y2G0	817 aa		12.62	□□□□□ -0.39
TMPO-212	ENST00000556029	CASTOR2	A6NHX0	329 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	MAF	O75444	373 aa	Predicted RBP	12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	NDST1	P52848	882 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	PTPN11	Q06124	597 aa	Predicted RBP	12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	MMRN1	Q13201	1228 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	ANKLE1	Q8NAG6	615 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	ZNF398	Q8TD17	642 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	APOPT1	Q96IL0	206 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	OLFM3	Q96PB7	478 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	KATNAL1	Q9BW62	490 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	PIH1D1	Q9NWS0	290 aa	Known RBP	12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	KNL1	Q8NG31	2342 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	MYL2	P10916	166 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	GLRB	P48167	497 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	THEM5	Q8N1Q8	247 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	BANP	Q8N9N5	519 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	DCLRE1B	Q9H816	532 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	ADGRA2	Q96PE1	1338 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	HNRNPCL2	B2RXH8	293 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	ANGPT2	O15123	496 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	AVIL	O75366	819 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	CPB1	P15086	417 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	GPD1	P21695	349 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	OR1G1	P47890	313 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	CSE1L	P55060	971 aa	Known RBP	12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	PLOD1	Q02809	727 aa	Predicted RBP	12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	SLC25A11	Q02978	314 aa	Known RBP	12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	THEMIS2	Q5TEJ8	643 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	UTS2B	Q765I0	119 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	ZBED3	Q96IU2	234 aa	Predicted RBP	12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	BTBD10	Q9BSF8	475 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	DENND2D	Q9H6A0	471 aa	Predicted RBP	12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	LMCD1	Q9NZU5	365 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	KIF17	Q9P2E2	1029 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	SLC39A10	Q9ULF5	831 aa		12.61	□□□□□ -0.39
TMPO-212	ENST00000556029	TCRBV9S1A1T	A0A576	114 aa		12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms