RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 DSTYKQ6XUX3 929 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 TIFABQ6ZNK6 161 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 LRRC74BQ6ZQY2 392 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 DENND5BQ6ZUT9 1274 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 CYS1Q717R9 158 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 ARMCX2Q7L311 632 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 FASTKD5Q7L8L6 764 aaKnown RBP7.21□□□□□ -1.25
TDP1-213ENST00000555880 NET1Q7Z628 596 aaPredicted RBP7.21□□□□□ -1.25
TDP1-213ENST00000555880 TTC7BQ86TV6 843 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 WDR75Q8IWA0 830 aaKnown RBP7.21□□□□□ -1.25
TDP1-213ENST00000555880 LINC01465Q8N7H1 131 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 C7orf31Q8N865 590 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 PPTC7Q8NI37 304 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 PPP4R1Q8TF05 950 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 HTR3CQ8WXA8 447 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 CDCA5Q96FF9 252 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 SIGLEC10Q96LC7 697 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 FAM161BQ96MY7 647 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 CSPG4P5Q96PW8 444 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 PRKD2Q9BZL6 878 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 VCXQ9H320 206 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 FAM96AQ9H5X1 160 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 STN1Q9H668 368 aaKnown RBP7.21□□□□□ -1.25
TDP1-213ENST00000555880 TXNRD2Q9NNW7 524 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 NMRK1Q9NWW6 199 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 RCOR3Q9P2K3 495 aaPredicted RBP7.21□□□□□ -1.25
TDP1-213ENST00000555880 STX18Q9P2W9 335 aaKnown RBP7.21□□□□□ -1.25
TDP1-213ENST00000555880 RBPJLQ9UBG7 517 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 MORF4L1Q9UBU8 362 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 ZNF212Q9UDV6 495 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 SORCS3Q9UPU3 1222 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 LRCH1Q9Y2L9 728 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 UTRNP46939 3433 aa7.21□□□□□ -1.25
TDP1-213ENST00000555880 A0A0A0MRY4 1105 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 SPDYE5A6NIY4 337 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 CAPN14A8MX76 684 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 F8W8V4 182 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 UGT1A9O60656 530 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 OPHN1O60890 802 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 GLRA3O75311 464 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 SNNO75324 88 aaPredicted RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 KRT36O76013 467 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 NPTXRO95502 500 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 SERPINA6P08185 405 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 PDHA1P08559 390 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 LCP1P13796 627 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 PGAM1P18669 254 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 ADORA2BP29275 332 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 CDC25CP30307 473 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 GARSP41250 739 aaKnown RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 RAP1GDS1P52306 607 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 ALDH18A1P54886 795 aaKnown RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 PDE1BQ01064 536 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 KDSRQ06136 332 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 PPIL2Q13356 520 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 THOC5Q13769 683 aaKnown RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 NBPF20Q3BBV1 942 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 ACSBG2Q5FVE4 666 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 EFHC1Q5JVL4 640 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 STEAP4Q687X5 459 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 SLC27A1Q6PCB7 646 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 TRMT10BQ6PF06 316 aaKnown RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 ZNF534Q76KX8 674 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 MARK2Q7KZI7 788 aaKnown RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 SCUBE1Q8IWY4 988 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 ANKRD52Q8NB46 1076 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 SHCBP1Q8NEM2 672 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 SREK1Q8WXA9 508 aaKnown RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 CENPIQ92674 756 aaPredicted RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 PRR11Q96HE9 360 aaPredicted RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 CLMNQ96JQ2 1002 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 SPATA13Q96N96 652 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 KCTD15Q96SI1 283 aaPredicted RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 B3GNT5Q9BYG0 378 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 SNX25Q9H3E2 840 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 UGT1A7Q9HAW7 530 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 UGT1A10Q9HAW8 530 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 UGT1A8Q9HAW9 530 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 VTA1Q9NP79 307 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 EIF2B3Q9NR50 452 aaKnown RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 SMYD2Q9NRG4 433 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.21□□□□□ -1.26
TDP1-213ENST00000555880 MARCOQ9UEW3 520 aaPredicted RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 DCDC2Q9UHG0 476 aa7.21□□□□□ -1.26
TDP1-213ENST00000555880 MYO18AQ92614 2054 aaKnown RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 DICER1Q9UPY3 1922 aaKnown RBP7.21□□□□□ -1.26
TDP1-213ENST00000555880 WDR27A2RRH5 827 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 H3BRB1 525 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 CYB561D2O14569 222 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 PPP1R12AO14974 1030 aaPredicted RBP7.2□□□□□ -1.26
TDP1-213ENST00000555880 ALDH1A2O94788 518 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 GRK2P25098 689 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 ABL2P42684 1182 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 CPA2P48052 419 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 AP2B1P63010 937 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 CCNA1P78396 465 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 CDC42EP1Q00587 391 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 AP1B1Q10567 949 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 PDK1Q15118 436 aa7.2□□□□□ -1.26
TDP1-213ENST00000555880 GRIK4Q16099 956 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms