RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 MARK1Q9P0L2 795 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 FZD10Q9ULW2 581 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 USP18Q9UMW8 372 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 PPP2R2CQ9Y2T4 447 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 HS3ST4Q9Y661 456 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 HELZP42694 1942 aaKnown RBP13.13□□□□□ -0.31
SYNE2-219ENST00000555323 GOLGA6L7A0A1B0GV03 622 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 SCAMP3O14828 347 aaKnown RBP13.13□□□□□ -0.31
SYNE2-219ENST00000555323 NARSO43776 548 aaKnown RBP13.13□□□□□ -0.31
SYNE2-219ENST00000555323 PRPSAP2O60256 369 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 BUB1BO60566 1050 aaPredicted RBP13.13□□□□□ -0.31
SYNE2-219ENST00000555323 SLC34A2O95436 690 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 GLULP15104 373 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 ARSAP15289 507 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 IL1R2P27930 398 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 SLC6A4P31645 630 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 SLC25A11Q02978 314 aaKnown RBP13.13□□□□□ -0.31
SYNE2-219ENST00000555323 NR1H3Q13133 447 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 MESDQ14696 234 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 IFI16Q16666 785 aaKnown RBP13.13□□□□□ -0.31
SYNE2-219ENST00000555323 ITPRIPL2Q3MIP1 535 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 LY6G5CQ5SRR4 150 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 ERMARDQ5T6L9 678 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 PIK3R6Q5UE93 754 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 RNF43Q68DV7 783 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 SCYL2Q6P3W7 929 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 TMEM25Q86YD3 366 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 ZNF683Q8IZ20 524 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 CCDC185Q8N715 623 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 TTC16Q8NEE8 873 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 NECAB3Q96P71 396 aaPredicted RBP13.13□□□□□ -0.31
SYNE2-219ENST00000555323 PEBP4Q96S96 227 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 UHRF1Q96T88 793 aaPredicted RBP13.13□□□□□ -0.31
SYNE2-219ENST00000555323 TMPRSS4Q9NRS4 437 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 GTSE1Q9NYZ3 720 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 WNT16Q9UBV4 365 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 ALG6Q9Y672 507 aa13.13□□□□□ -0.31
SYNE2-219ENST00000555323 IGLV3-10A0A075B6K4 115 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 DRGXA6NNA5 263 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 HOXC11O43248 304 aaPredicted RBP13.12□□□□□ -0.31
SYNE2-219ENST00000555323 BUB1O43683 1085 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 MOCS2O96007 188 aaPredicted RBP13.12□□□□□ -0.31
SYNE2-219ENST00000555323 ADH1CP00326 375 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 PENKP01210 267 aaPredicted RBP13.12□□□□□ -0.31
SYNE2-219ENST00000555323 CYP17A1P05093 508 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 TACR2P21452 398 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 L1CAMP32004 1257 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 GAD2Q05329 585 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 TNK2Q07912 1038 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 AUHQ13825 339 aaKnown RBP13.12□□□□□ -0.31
SYNE2-219ENST00000555323 HADHQ16836 314 aaKnown RBP13.12□□□□□ -0.31
SYNE2-219ENST00000555323 GAB4Q2WGN9 574 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 MANEALQ5VSG8 457 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 LRRC38Q5VT99 294 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 FYB2Q5VWT5 728 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 C11orf63Q6NUN7 778 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 FBXL22Q6P050 247 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 CPA6Q8N4T0 437 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 LRRC57Q8N9N7 239 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 FAM71BQ8TC56 605 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 TEKT4Q8WW24 435 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 TMA16Q96EY4 203 aaKnown RBP13.12□□□□□ -0.31
SYNE2-219ENST00000555323 P2RY11Q96G91 374 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 RETREG1Q9H6L5 497 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 C8orf33Q9H7E9 229 aaPredicted RBP13.12□□□□□ -0.31
SYNE2-219ENST00000555323 PPARGC1AQ9UBK2 798 aaKnown RBP13.12□□□□□ -0.31
SYNE2-219ENST00000555323 TRIM10Q9UDY6 481 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 OR12D3Q9UGF7 316 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 PCSK1NQ9UHG2 260 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 FBXO10Q9UK96 956 aa13.12□□□□□ -0.31
SYNE2-219ENST00000555323 KIF26AQ9ULI4 1882 aaPredicted RBP13.12□□□□□ -0.31
SYNE2-219ENST00000555323 F5H5T6 163 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 ZSCAN12O43309 604 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 KRT7P08729 469 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 TCF4P15884 667 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 COMTP21964 271 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 GJA4P35212 333 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 ZNF135P52742 658 aaPredicted RBP13.11□□□□□ -0.31
SYNE2-219ENST00000555323 AMPD2Q01433 879 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 SEMA3BQ13214 749 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 SLC44A4Q53GD3 710 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 DAB2IPQ5VWQ8 1189 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 RAP1GAP2Q684P5 730 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 RFWD3Q6PCD5 774 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 POLNQ7Z5Q5 900 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 C14orf80Q86SX3 495 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 REXO1L1PQ8IX06 675 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 KIAA1524Q8TCG1 905 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 CSGALNACT1Q8TDX6 532 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 CHFRQ96EP1 664 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 MYEOVQ96EZ4 313 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 MSANTD3Q96H12 275 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 SNRNP25Q9BV90 132 aaKnown RBP13.11□□□□□ -0.31
SYNE2-219ENST00000555323 MAGEB5Q9BZ81 275 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 SIK2Q9H0K1 926 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 MUTYHQ9UIF7 546 aa13.11□□□□□ -0.31
SYNE2-219ENST00000555323 A0A0A0MRY4 1105 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms