RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 C11orf63Q6NUN7 778 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 Q6ZNB5 142 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 CREG2Q8IUH2 290 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 DENND1CQ8IV53 801 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 BBS7Q8IWZ6 715 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 ARFGAP1Q8N6T3 406 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 EMC1Q8N766 993 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 JOSD2Q8TAC2 188 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 RIN3Q8TB24 985 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 COG1Q8WTW3 980 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 RXFP2Q8WXD0 754 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 EDAQ92838 391 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 CALR3Q96L12 384 aaKnown RBP11.32□□□□□ -0.6
SHMT2-218ENST00000555213 NPY6RQ99463 290 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 FAM83CQ9BQN1 747 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 DDX23Q9BUQ8 820 aaKnown RBP11.32□□□□□ -0.6
SHMT2-218ENST00000555213 EBF3Q9H4W6 596 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 C8orf33Q9H7E9 229 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-218ENST00000555213 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.32□□□□□ -0.6
SHMT2-218ENST00000555213 LCMT1Q9UIC8 334 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 SNX12Q9UMY4 172 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 PIAS3Q9Y6X2 628 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 XIRP2A4UGR9 3374 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 ARNTLO00327 626 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 MOCS2O96007 188 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-218ENST00000555213 CYBBP04839 570 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 ARSAP15289 507 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 COMTP21964 271 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 PSMA2P25787 234 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 ZNF143P52747 638 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-218ENST00000555213 MLLT6P55198 1093 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-218ENST00000555213 ATP11AP98196 1134 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 PRKCQQ04759 706 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 MESDQ14696 234 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 PPP2R5DQ14738 602 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 MLF2Q15773 248 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-218ENST00000555213 ARL13BQ3SXY8 428 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 BRMS1LQ5PSV4 323 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 ACBD5Q5T8D3 534 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-218ENST00000555213 TRIM68Q6AZZ1 485 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 DAAM2Q86T65 1068 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 ATP6V0D2Q8N8Y2 350 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 NT5C3BQ969T7 300 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 FAM122AQ96E09 287 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 PGAP3Q96FM1 320 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-218ENST00000555213 ASIC4Q96FT7 647 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 BTN2A3PQ96KV6 586 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 FCRL2Q96LA5 508 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-218ENST00000555213 CFAP57Q96MR6 1250 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 ALS2CR12Q96Q35 445 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 OSBPL9Q96SU4 736 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 TBCBQ99426 244 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 CNPY3Q9BT09 278 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 MFSD1Q9H3U5 465 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 ECT2Q9H8V3 914 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 AGO1Q9UL18 857 aaKnown RBP11.31□□□□□ -0.6
SHMT2-218ENST00000555213 MRPS17Q9Y2R5 130 aaKnown RBP11.31□□□□□ -0.6
SHMT2-218ENST00000555213 SAR1BQ9Y6B6 198 aa11.31□□□□□ -0.6
SHMT2-218ENST00000555213 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-218ENST00000555213 MAN2B1O00754 1011 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 ACSL4O60488 711 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 GREM1O60565 184 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 PROSCO94903 275 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 CYP17A1P05093 508 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 ADH5P11766 374 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 PITX1P78337 314 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-218ENST00000555213 GAD2Q05329 585 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 TNK2Q07912 1038 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 CDO1Q16878 200 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 ANO4Q32M45 955 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 CCDC14Q49A88 953 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 SLC44A4Q53GD3 710 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 ZC3H12AQ5D1E8 599 aaKnown RBP11.3□□□□□ -0.6
SHMT2-218ENST00000555213 ADGRF1Q5T601 910 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 DCAF12L1Q5VU92 463 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 TRIM67Q6ZTA4 783 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 STRADAQ7RTN6 431 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 PEX26Q7Z412 305 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 RALGPS2Q86X27 583 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-218ENST00000555213 SYCE1Q8N0S2 351 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 SIX5Q8N196 739 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 CPXM2Q8N436 756 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 FNIP1Q8TF40 1166 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 FAM172AQ8WUF8 416 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 ALG3Q92685 438 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 KRT35Q92764 455 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 AZIN2Q96A70 460 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 SLC39A13Q96H72 371 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 NCAPGQ9BPX3 1015 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 LINC00597Q9H2U6 94 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 WDCPQ9H6R7 721 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 HPS4Q9NQG7 708 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 SPHK2Q9NRA0 654 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 HEBP1Q9NRV9 189 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 PIGVQ9NUD9 493 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 GTSE1Q9NYZ3 720 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 ANAPC7Q9UJX3 599 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 AMFRQ9UKV5 643 aa11.3□□□□□ -0.6
SHMT2-218ENST00000555213 CA14Q9ULX7 337 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms