RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 MSANTD2Q6P1R3 559 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 LCLAT1Q6UWP7 414 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 SERPINA13PQ6UXR4 307 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 SIX6OS1Q8N1H7 587 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 ZCCHC9Q8N567 271 aaKnown RBP16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 C1orf216Q8TAB5 229 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 WFIKKN2Q8TEU8 576 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 RNF139Q8WU17 664 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 TFAP2BQ92481 460 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 PRCCQ92733 491 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 ZSWIM1Q9BR11 485 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 TMEM245Q9H330 911 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 ABCC13Q9NSE7 274 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 KIAA1257Q9ULG3 409 aa16.36■□□□□ 0.21
ARHGEF40-205ENST00000555052 METTL12A8MUP2 240 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 SH3BP5O60239 455 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 TSPAN3O60637 253 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 IGLV3-27P01718 113 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 PAEPP09466 180 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 HLA-EP13747 358 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 FMO5P49326 533 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 SGSHP51688 502 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 BNC1Q01954 994 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 LRMPQ12912 555 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 ZNF423Q2M1K9 1284 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 DCAF12L1Q5VU92 463 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 RAB44Q7Z6P3 723 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 ADIPOR2Q86V24 386 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 CACUL1Q86Y37 369 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 OR2T3Q8NH03 318 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 SLC35F5Q8WV83 523 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 ERCC4Q92889 916 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 CAMK1GQ96NX5 476 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 NUP58Q9BVL2 599 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 PCED1AQ9H1Q7 454 aa16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 RALYQ9UKM9 306 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-205ENST00000555052 SMC2O95347 1197 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 PTPRNQ16849 979 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 PMF1Q6P1K2 205 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 TMEM270Q6UE05 265 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 CHST9Q7L1S5 443 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 NAXDQ8IW45 347 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 CHCHD4Q8N4Q1 142 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 WFDC5Q8TCV5 224 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 CYB5D2Q8WUJ1 264 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 IRGQQ8WZA9 623 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 SMARCE1Q969G3 411 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 TMA16Q96EY4 203 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 METTL14Q9HCE5 456 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 ABCB8Q9NUT2 735 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 GGA2Q9UJY4 613 aa16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.34■□□□□ 0.21
ARHGEF40-205ENST00000555052 BCAT2O15382 392 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 CBFA2T3O75081 653 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 ZNF883P0CG24 379 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 ACADMP11310 421 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 PABPC1P11940 636 aaKnown RBP16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 LCP1P13796 627 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 RGS7P49802 495 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 ARID5AQ03989 594 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 TRIP6Q15654 476 aaKnown RBP16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 CNGA2Q16280 664 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 FNDC3BQ53EP0 1204 aaKnown RBP16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 FAM133BQ5BKY9 247 aaKnown RBP16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 MPP7Q5T2T1 576 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 PIK3R6Q5UE93 754 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 AHI1Q8N157 1196 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 LMO3Q8TAP4 145 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 ZCCHC14Q8WYQ9 949 aaKnown RBP16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 KAT5Q92993 513 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 CEP63Q96MT8 703 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 TIGD1Q96MW7 591 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 IRX2Q9BZI1 471 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 MIR1-1HGQ9H1L0 117 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 LHX5Q9H2C1 402 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 EIF2B4Q9UI10 523 aaKnown RBP16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 SLCO1B1Q9Y6L6 691 aa16.33■□□□□ 0.2
ARHGEF40-205ENST00000555052 SRRM3A6NNA2 597 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 RNF225M0QZC1 329 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 PSMA7O14818 248 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 KALRNO60229 2985 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 CAPNS1P04632 268 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 DLDP09622 509 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 RDXP35241 583 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 RING1Q06587 406 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 BPTFQ12830 3046 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 RFWD3Q6PCD5 774 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 ZNF366Q8N895 744 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 CLEC4CQ8WTT0 213 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 LMLNQ96KR4 655 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 HSFY1Q96LI6 401 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 NT5C1BQ96P26 610 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 FBRSQ9HAH7 460 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 IL21RQ9HBE5 538 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 PLA2G4CQ9UP65 541 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 FNDC3AQ9Y2H6 1198 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 PCDHB4Q9Y5E5 795 aa16.32■□□□□ 0.2
ARHGEF40-205ENST00000555052 M0QYV0 167 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms