RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	MAP9	Q49MG5	647 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	RGS7BP	Q6MZT1	257 aa	Predicted RBP	6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	FBXO42	Q6P3S6	717 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	MAVS	Q7Z434	540 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	UBE2Q1	Q7Z7E8	422 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	ANKRD23	Q86SG2	305 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	ZNF280B	Q86YH2	543 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	MPP5	Q8N3R9	675 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	BOLL	Q8N9W6	283 aa	Known RBP	6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	FAM156A	Q8NDB6	213 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	OR6B3	Q8NGW1	331 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	ANKS1A	Q92625	1134 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	PBK	Q96KB5	322 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	BBC3	Q96PG8	261 aa	Predicted RBP	6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	DPH1	Q9BZG8	443 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	FAM204A	Q9H8W3	233 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	TMOD2	Q9NZR1	351 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	CPNE7	Q9UBL6	633 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	TBC1D30	Q9Y2I9	924 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	ZHX2	Q9Y6X8	837 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	GAK	O14976	1311 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	FRMPD2	Q68DX3	1309 aa	Predicted RBP	6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	SALL1	Q9NSC2	1324 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	ZSWIM8	A7E2V4	1837 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	MYO1C	O00159	1063 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	MYO1F	O00160	1098 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	C1QL1	O75973	258 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	TH	P07101	528 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	UBTFL1	P0CB47	393 aa	Predicted RBP	6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	TRIM27	P14373	513 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	IL15	P40933	162 aa	Predicted RBP	6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	RARS	P54136	660 aa	Known RBP	6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	RHBDL3	P58872	404 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	PRKCZ	Q05513	592 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	TFCP2	Q12800	502 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	SLC13A2	Q13183	592 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	GORAB	Q5T7V8	394 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	TSTD2	Q5T7W7	516 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	LMBRD2	Q68DH5	695 aa	Predicted RBP	6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	CCDC149	Q6ZUS6	474 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	RD3	Q7Z3Z2	195 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	PRIMA1	Q86XR5	153 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	PTDSS2	Q9BVG9	487 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	IDI2	Q9BXS1	227 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	BHMT2	Q9H2M3	363 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	ZCCHC17	Q9NP64	241 aa	Known RBP	6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956	AFG3L2	Q9Y4W6	797 aa		6.05	□□□□□ -1.44
PSMC6-208	ENST00000554956		A0A1B0GUL7	405 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	CXCL11	O14625	94 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	TPP1	O14773	563 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	URI1	O94763	535 aa	Predicted RBP	6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	CCL5	P13501	91 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	ZFX	P17010	805 aa	Predicted RBP	6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	BTD	P43251	543 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	SUMO3	P55854	103 aa	Predicted RBP	6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	MECOM	Q03112	1051 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	PICALM	Q13492	652 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	SHROOM1	Q2M3G4	852 aa	Predicted RBP	6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	TREML2	Q5T2D2	321 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	ICE2	Q659A1	982 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	EXOC8	Q8IYI6	725 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	SCYL3	Q8IZE3	742 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	SAMD3	Q8N6K7	520 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	ATG4A	Q8WYN0	398 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	TTC17	Q96AE7	1141 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	TIFA	Q96CG3	184 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	MOGAT1	Q96PD6	335 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	MESP1	Q9BRJ9	268 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	ALG8	Q9BVK2	526 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	MS4A7	Q9GZW8	240 aa	Predicted RBP	6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	CXorf36	Q9H7Y0	433 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	EHD3	Q9NZN3	535 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	HMG20B	Q9P0W2	317 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	NDRG4	Q9ULP0	352 aa	Known RBP	6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	SHOC2	Q9UQ13	582 aa		6.04	□□□□□ -1.44
PSMC6-208	ENST00000554956	ARAP2	Q8WZ64	1704 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	GPR75-ASB3	A0A0A6YYF3	556 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	PNMA6E	A0A0J9YXQ4	647 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	CCDC151	A5D8V7	595 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	ORC4	O43929	436 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	TBC1D4	O60343	1298 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	ENTPD3	O75355	529 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	BCAR3	O75815	825 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	IGLV2-14	P01704	120 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	EBLN1	P0CF75	366 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	BRAF	P15056	766 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	PPIF	P30405	207 aa	Known RBP	6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	LIPA	P38571	399 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	KRT17	Q04695	432 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	MYO1E	Q12965	1108 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	MTX1	Q13505	466 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	KIAA0753	Q2KHM9	967 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	AKNAD1	Q5T1N1	836 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	RNF220	Q5VTB9	566 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	DCAF12L1	Q5VU92	463 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	CHST15	Q7LFX5	561 aa	Predicted RBP	6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	OR56A3	Q8NH54	315 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	RAET1E	Q8TD07	263 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	MORC4	Q8TE76	937 aa		6.03	□□□□□ -1.44
PSMC6-208	ENST00000554956	LRTOMT	Q8WZ04	291 aa		6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms