RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 PITX1P78337 314 aaPredicted RBP13□□□□□ -0.33
PPP4R3A-206ENST00000554943 ATP11AP98196 1134 aa13□□□□□ -0.33
PPP4R3A-206ENST00000554943 KRT81Q14533 505 aa13□□□□□ -0.33
PPP4R3A-206ENST00000554943 PCLAFQ15004 111 aa13□□□□□ -0.33
PPP4R3A-206ENST00000554943 SETDB1Q15047 1291 aa13□□□□□ -0.33
PPP4R3A-206ENST00000554943 KIZQ2M2Z5 673 aa13□□□□□ -0.33
PPP4R3A-206ENST00000554943 TREML1Q86YW5 311 aa13□□□□□ -0.33
PPP4R3A-206ENST00000554943 TRIM55Q9BYV6 548 aa13□□□□□ -0.33
PPP4R3A-206ENST00000554943 HBS1LQ9Y450 684 aaKnown RBP13□□□□□ -0.33
PPP4R3A-206ENST00000554943 ZBED1O96006 694 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 IGFBP6P24592 240 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 ALDH3A1P30838 453 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 NOS2P35228 1153 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 GTF2A2P52657 109 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 ZNF33AQ06730 810 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 PPIDQ08752 370 aaKnown RBP12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 TEDDM1Q5T9Z0 273 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 APBB1IPQ7Z5R6 666 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 NME8Q8N427 588 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 B3GALNT2Q8NCR0 500 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 KLF6Q99612 283 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 SORCS3Q9UPU3 1222 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 H7C0C1 242 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 PIM1P11309 404 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 PGAM1P18669 254 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 ATP5OP48047 213 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 CRYBB1P53674 252 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 FKBP1BP68106 108 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 MGAT3Q09327 533 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 BST1Q10588 318 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 AFMIDQ63HM1 303 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 OLFML2BQ68BL8 750 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 RFWD3Q6PCD5 774 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 LONP2Q86WA8 852 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 CCDC117Q8IWD4 279 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 VPS52Q8N1B4 723 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 NSMCE1Q8WV22 266 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 TFB1MQ8WVM0 346 aaKnown RBP12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 NRG4Q8WWG1 115 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 NSL1Q96IY1 281 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 RTP3Q9BQQ7 232 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 FAM49BQ9NUQ9 324 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 HEY2Q9UBP5 337 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 BAIAP2L1Q9UHR4 511 aa12.99□□□□□ -0.33
PPP4R3A-206ENST00000554943 GOLGA8RI6L899 631 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 CCDC22O60826 627 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 SIN3BO75182 1162 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 KRT37O76014 449 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 PROCP04070 461 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 SERPINB3P29508 390 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 CD68P34810 354 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 RDXP35241 583 aaKnown RBP12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 GNL1P36915 607 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 PDE1CQ14123 709 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 PACS1Q6VY07 963 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 CRTAC1Q9NQ79 661 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 HES2Q9Y543 173 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 SHROOM3Q8TF72 1996 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 F8W8V4 182 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 INHBAP08476 426 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 RASSF2P50749 326 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 CDO1Q16878 200 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 FYB2Q5VWT5 728 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 ZNF567Q8N184 647 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 SLC2A14Q8TDB8 520 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 P2RY11Q96G91 374 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 ZNF560Q96MR9 790 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 FCRL3Q96P31 734 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 TSGA13Q96PP4 275 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 ZNF385DQ9H6B1 395 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 FBXO6Q9NRD1 293 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 PIGVQ9NUD9 493 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 DDX43Q9NXZ2 648 aaKnown RBP12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 IPPQ9Y573 584 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 TROVE2P10155 538 aaKnown RBP eCLIP12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 MAP2K2P36507 400 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 TNK2Q07912 1038 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 CRYMQ14894 314 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 MANEALQ5VSG8 457 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 ARMC3Q5W041 872 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 MRPL10Q7Z7H8 261 aaKnown RBP12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 PIGZQ86VD9 579 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 TRIM42Q8IWZ5 723 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 STKLD1Q8NE28 680 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 OR6J1Q8NGC5 347 aa12.98□□□□□ -0.33
PPP4R3A-206ENST00000554943 VWA8A3KMH1 1905 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 FAM237BA0A1B0GVD1 139 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 PLIN3O60664 434 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 APRTP07741 180 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 NPR3P17342 541 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 AMPD1P23109 780 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 DNAJB1P25685 340 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 GALNT2Q10471 571 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 OVGP1Q12889 678 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 TBCCQ15814 346 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 SV2CQ496J9 727 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 TTC7BQ86TV6 843 aa12.97□□□□□ -0.33
PPP4R3A-206ENST00000554943 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms