RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, human

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-208	ENST00000554929	PTGIR	P43119	386 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	YWHAE	P62258	255 aa	Known RBP	10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	GNGT1	P63211	74 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	CENPC	Q03188	943 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	DHX9	Q08211	1270 aa	Known RBP	10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZNF211	Q13398	564 aa	Predicted RBP	10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	PON2	Q15165	354 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	PSMD5	Q16401	504 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	PKN3	Q6P5Z2	889 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	C1orf228	Q6PIY5	440 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	TXNDC11	Q6PKC3	985 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	CEP128	Q6ZU80	1094 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	B4GALNT4	Q76KP1	1039 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	WDR49	Q8IV35	697 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZBTB8OS	Q8IWT0	167 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	C3orf20	Q8ND61	904 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	ASAP3	Q8TDY4	903 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	DEPDC1B	Q8WUY9	529 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	TCEAL4	Q96EI5	215 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	FAXDC2	Q96IV6	333 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	NLRP4	Q96MN2	994 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	ASB16	Q96NS5	453 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	MRPL4	Q9BYD3	311 aa	Known RBP	10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	TXLNGY	Q9BZA5	131 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	STMN4	Q9H169	189 aa	Predicted RBP	10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	DPH5	Q9H2P9	285 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	SLC24A3	Q9HC58	644 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	UBN1	Q9NPG3	1134 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	NFS1	Q9Y697	457 aa		10.83	□□□□□ -0.68
SRSF5-208	ENST00000554929	ATG2B	Q96BY7	2078 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	MYO1F	O00160	1098 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	EBAG9	O00559	213 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	CLDN3	O15551	220 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	MEFV	O15553	781 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	ASAP2	O43150	1006 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	PSTPIP1	O43586	416 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	TOM1L1	O75674	476 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	POU2F2	P09086	479 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	CLTA	P09496	248 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	NUDT17	P0C025	328 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	PYGM	P11217	842 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	PTPN2	P17706	415 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	MAPK8	P45983	427 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	CAV1	Q03135	178 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	IFFO1	Q0D2I5	559 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	TFDP1	Q14186	410 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	TRADD	Q15628	312 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	FAM171A1	Q5VUB5	890 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	TDRD10	Q5VZ19	366 aa	Known RBP	10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	CCDC137	Q6PK04	289 aa	Known RBP	10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZNF410	Q86VK4	478 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	PHF13	Q86YI8	300 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	BRSK2	Q8IWQ3	736 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	YAF2	Q8IY57	180 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	PRELID2	Q8N945	189 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	HASPIN	Q8TF76	798 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	KRT35	Q92764	455 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	TMEM143	Q96AN5	459 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	MSANTD3	Q96H12	275 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZFP42	Q96MM3	310 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	CORO1B	Q9BR76	489 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	TTPAL	Q9BTX7	342 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	CNOT10	Q9H9A5	744 aa	Known RBP	10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZDHHC18	Q9NUE0	388 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	CACNG4	Q9UBN1	327 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	ANAPC7	Q9UJX3	599 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	PCDHB4	Q9Y5E5	795 aa		10.82	□□□□□ -0.68
SRSF5-208	ENST00000554929	FREM2	Q5SZK8	3169 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	WDR27	A2RRH5	827 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	SPECC1L-ADORA2A	F8WAN1	911 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	NDC80	O14777	642 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	OGT	O15294	1046 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	PROSC	O94903	275 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	ECEL1	O95672	775 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	LSM8	O95777	96 aa	Known RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	ACO1	P21399	889 aa	Known RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	GNA15	P30679	374 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	OR1D2	P34982	312 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	MDH1	P40925	334 aa	Known RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	ACOT2	P49753	483 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	PMS2	P54278	862 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	MLLT6	P55198	1093 aa	Predicted RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	ZNF844	Q08AG5	666 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	CCIN	Q13939	588 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	UAP1	Q16222	522 aa	Predicted RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	SGSM1	Q2NKQ1	1148 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	UBXN11	Q5T124	520 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	NAA35	Q5VZE5	725 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	DENND2C	Q68D51	928 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	CDCA2	Q69YH5	1023 aa	Predicted RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	LYPD8	Q6UX82	237 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	MICALCL	Q6ZW33	695 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	MON1B	Q7L1V2	547 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	MFSD6L	Q8IWD5	586 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	RHOT1	Q8IXI2	618 aa		10.81	□□□□□ -0.68
SRSF5-208	ENST00000554929	SYNPO	Q8N3V7	929 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms