RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 OXTRP30559 389 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 SLC8A3P57103 927 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 DAOAP59103 153 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 GRIK2Q13002 908 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 CAMK2GQ13555 558 aaPredicted RBP12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 PTPRNQ16849 979 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 MPPE1Q53F39 396 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 ADGRF1Q5T601 910 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 DCAF12L1Q5VU92 463 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 MSANTD2Q6P1R3 559 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 LCLAT1Q6UWP7 414 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 RAB44Q7Z6P3 723 aaPredicted RBP12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 WFDC5Q8TCV5 224 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 CYB5D2Q8WUJ1 264 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 PRCCQ92733 491 aaPredicted RBP12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 KAT5Q92993 513 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 TMA16Q96EY4 203 aaKnown RBP12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 LMLNQ96KR4 655 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 NUP58Q9BVL2 599 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 CIPCQ9C0C6 399 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 CNGB3Q9NQW8 809 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 RMND1Q9NWS8 449 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 SUSD2Q9UGT4 822 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 ARMCX3Q9UH62 379 aaPredicted RBP12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 KIAA1257Q9ULG3 409 aa12.75□□□□□ -0.37
MTHFD1-207ENST00000554677 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 ASXL3Q9C0F0 2248 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 GOLGA6L7A0A1B0GV03 622 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 TMEM8BA6NDV4 472 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 SRRM3A6NNA2 597 aaPredicted RBP12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 TAF4O00268 1085 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 CBFA2T3O75081 653 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 LATS1O95835 1130 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 LCP1P13796 627 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 GNSP15586 552 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 FMO5P49326 533 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 HARS2P49590 506 aaKnown RBP12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 RGS7P49802 495 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 TRIP6Q15654 476 aaKnown RBP12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 CNGA2Q16280 664 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 DBX2Q6ZNG2 339 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 ZCCHC9Q8N567 271 aaKnown RBP12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 ZNF366Q8N895 744 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 OR2T3Q8NH03 318 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 CLEC4CQ8WTT0 213 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 MYEOVQ96EZ4 313 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 IPO9Q96P70 1041 aaKnown RBP12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 TSG101Q99816 390 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 ZDHHC5Q9C0B5 715 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 IL21RQ9HBE5 538 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 ABCC13Q9NSE7 274 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 ABCB8Q9NUT2 735 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 HESX1Q9UBX0 185 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 CELSR3Q9NYQ7 3312 aa12.74□□□□□ -0.37
MTHFD1-207ENST00000554677 MEI4A8MW99 385 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 PIK3R2O00459 728 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 FYNP06241 537 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 PAEPP09466 180 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 SETSIPP0DME0 302 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 BMP6P22004 513 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 TBXAS1P24557 533 aaPredicted RBP12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 SLC6A4P31645 630 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 ACSL1P33121 698 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 YWHAEP62258 255 aaKnown RBP12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 LRRC63Q05C16 580 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 HNRNPDQ14103 355 aaKnown RBP12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 E2F5Q15329 346 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 FAM133BQ5BKY9 247 aaKnown RBP12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 PIK3R6Q5UE93 754 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 ISM2Q6H9L7 571 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 NADSYN1Q6IA69 706 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 RFWD3Q6PCD5 774 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 TMEM270Q6UE05 265 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 SERPINA13PQ6UXR4 307 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 CHST9Q7L1S5 443 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 SLCO6A1Q86UG4 719 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 NAXDQ8IW45 347 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 RNF139Q8WU17 664 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 MYO19Q96H55 970 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 MIR1-1HGQ9H1L0 117 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 SLC24A3Q9HC58 644 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 PRSS16Q9NQE7 514 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 EIF2B4Q9UI10 523 aaKnown RBP12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 PLXNA2O75051 1894 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 ATRXP46100 2492 aa12.73□□□□□ -0.37
MTHFD1-207ENST00000554677 H0Y626 953 aa12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 BCAT2O15382 392 aaPredicted RBP12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 TRIM16O95361 564 aa12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 PABPC1P11940 636 aaKnown RBP12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 BRD2P25440 801 aaKnown RBP12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 CD70P32970 193 aa12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 RPL34P49207 117 aaKnown RBP12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 ZNF445P59923 1031 aa12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 RPS14P62263 151 aaKnown RBP12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 ZNF423Q2M1K9 1284 aa12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 MPP7Q5T2T1 576 aa12.72□□□□□ -0.37
MTHFD1-207ENST00000554677 MBLAC2Q68D91 279 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms