RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 TRIM43BA6NCK2 446 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 MANSC4A6NHS7 340 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 AKR1B15C9JRZ8 316 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 EBAG9O00559 213 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 MCF2LO15068 1137 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 TRIM24O15164 1050 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 ASAP2O43150 1006 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 RASA4O43374 803 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 B3GALT2O43825 422 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 IDH3BO43837 385 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 KLHL41O60662 606 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 ALDH1A2O94788 518 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 PCDH8O95206 1070 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 LUC7L3O95232 432 aaKnown RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 OLFM2O95897 454 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 A1BGP04217 495 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 JMJD7P0C870 316 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 KRT13P13646 458 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 RPS2P15880 293 aaKnown RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 PRLRP16471 622 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 LMO1P25800 156 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 APOBEC3AP31941 199 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 HPDP32754 393 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 GNALP38405 381 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 ARHGAP25P42331 645 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 GNAQP50148 359 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 GUCY2FP51841 1108 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 KPNA1P52294 538 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 GPSM2P81274 684 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 PDE1BQ01064 536 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 RUNX1T1Q06455 604 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 SULT2A1Q06520 285 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 CD69Q07108 199 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 HSPA14Q0VDF9 509 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 KIF5AQ12840 1032 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 TRAP1Q12931 704 aaKnown RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 SNCBQ16143 134 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 SHROOM1Q2M3G4 852 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 C15orf59Q2T9L4 293 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 KRT71Q3SY84 523 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 FNDC3BQ53EP0 1204 aaKnown RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 SLC10A5Q5PT55 438 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 HYIQ5T013 277 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 NDUFAF5Q5TEU4 345 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 NCAPH2Q6IBW4 605 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 LVRNQ6Q4G3 990 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 OR52N2Q8NGI0 321 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 ZNF764Q96H86 408 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 FAM193BQ96PV7 902 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 HNRNPABQ99729 332 aaKnown RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 LSM14BQ9BX40 385 aaKnown RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 PUS3Q9BZE2 481 aaKnown RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 TRIM5Q9C035 493 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 NYXQ9GZU5 481 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 KCNH6Q9H252 994 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 EPC1Q9H2F5 836 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 SERHL2Q9H4I8 314 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 BICC1Q9H694 974 aaKnown RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 DNAJC18Q9H819 358 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 ZMAT4Q9H898 229 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 SYNPO2LQ9H987 977 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 KLC4Q9NSK0 619 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 PIH1D1Q9NWS0 290 aaKnown RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 DDX20Q9UHI6 824 aaKnown RBP4.68□□□□□ -1.66
ATXN3-227ENST00000554491 SNX5Q9Y5X3 404 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 ABCC4O15439 1325 aa4.68□□□□□ -1.66
ATXN3-227ENST00000554491 DDX60LQ5H9U9 1706 aaKnown RBP4.67□□□□□ -1.66
ATXN3-227ENST00000554491 TRIM64A6NGJ6 449 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 TRIM64BA6NI03 449 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 A6NNZ2 444 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 ELL2O00472 640 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-227ENST00000554491 YKT6O15498 198 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 MGRN1O60291 552 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 DNAJC6O75061 913 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 SMIM24O75264 130 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 RECQL4O94761 1208 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 MBD3O95983 291 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 MYL3P08590 195 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 SCG2P13521 617 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 GYPEP15421 78 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 TMOD1P28289 359 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 PRKAR1BP31321 381 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 ACADSBP45954 432 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 PIP4K2AP48426 406 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-227ENST00000554491 MCM2P49736 904 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 DSTNP60981 165 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 SP3Q02447 781 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 RELQ04864 619 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-227ENST00000554491 LRRC74AQ0VAA2 488 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 DRP2Q13474 957 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 SQSTM1Q13501 440 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 MAN2A1Q16706 1144 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 NDUFA5Q16718 116 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 WHAMMP3Q1A5X7 153 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 TUBB8Q3ZCM7 444 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 INO80DQ53TQ3 878 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-227ENST00000554491 CAVIN4Q5BKX8 364 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 WDR45BQ5MNZ6 344 aa4.67□□□□□ -1.66
ATXN3-227ENST00000554491 ODR4Q5SWX8 454 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms