RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 DDX1Q92499 740 aaKnown RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 BHMTQ93088 406 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 PPP1R13BQ96KQ4 1090 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 FCRL2Q96LA5 508 aaPredicted RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 SLC2A13Q96QE2 648 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 BPIFA3Q9BQP9 254 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 STK33Q9BYT3 514 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 VPS16Q9H269 839 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 HSD3B7Q9H2F3 369 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 CD248Q9HCU0 757 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 POLMQ9NP87 494 aaPredicted RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 PLA2G2EQ9NZK7 142 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 TJP2Q9UDY2 1190 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 NAALADL1Q9UQQ1 740 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 SIK3Q9Y2K2 1263 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 CEP83Q9Y592 693 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 MYO18AQ92614 2054 aaKnown RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 CKAP5Q14008 2032 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 RALGAPA1Q6GYQ0 2036 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 LGALS16A8MUM7 142 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 CAPN9O14815 690 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 FOXD2O60548 495 aaPredicted RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 DAB1O75553 588 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 EPN2O95208 641 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 LSM8O95777 96 aaKnown RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 TRUB2O95900 331 aaKnown RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 ERBB2P04626 1255 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 HOXB2P14652 356 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 TGM1P22735 817 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 FECHP22830 423 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 SLC6A4P31645 630 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 SCNN1AP37088 669 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 GABRB2P47870 512 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 JAM2P57087 298 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 LPAL2Q16609 132 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 GEN1Q17RS7 908 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 PLK5Q496M5 336 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 PTPN20Q4JDL3 420 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 USP39Q53GS9 565 aaKnown RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 PIK3R6Q5UE93 754 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 NADSYN1Q6IA69 706 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 SDE2Q6IQ49 451 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 ANO7Q6IWH7 933 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 FAM183BPQ6ZVS7 135 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 SLC26A9Q7LBE3 791 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 APTXQ7Z2E3 356 aaKnown RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 KBTBD6Q86V97 674 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 ZNF677Q86XU0 584 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 PASD1Q8IV76 773 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 KIAA2013Q8IYS2 634 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 CHPFQ8IZ52 775 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 ZNF557Q8N988 423 aaPredicted RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 TMEM35BQ8NCS4 154 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 ANKRD20A12PQ8NF67 263 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 WFIKKN2Q8TEU8 576 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 IPO4Q8TEX9 1081 aaKnown RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 UCMAQ8WVF2 138 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 TMA16Q96EY4 203 aaKnown RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 ERGIC2Q96RQ1 377 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 ACOX2Q99424 681 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 DDX50Q9BQ39 737 aaKnown RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 NAT10Q9H0A0 1025 aaKnown RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 DUSP15Q9H1R2 295 aaPredicted RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 ZDHHC4Q9NPG8 344 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 NYNRINQ9P2P1 1898 aaKnown RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 THAP10Q9P2Z0 257 aaPredicted RBP7.82□□□□□ -1.16
LINC00640-201ENST00000554409 CLEC4EQ9ULY5 219 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 PCDHGA5Q9Y5G8 931 aa7.82□□□□□ -1.16
LINC00640-201ENST00000554409 DMDP11532 3685 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 GVINP1Q7Z2Y8 2422 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 A0A1W2PQF6 199 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 TCRBV21S2A2A0A5A6 115 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 EPHB6O15197 1021 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 TIMM44O43615 452 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 TSPAN3O60637 253 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 RHOBTB1O94844 696 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 APOEP02649 317 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 GABRG2P18507 467 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 HLA-FP30511 346 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 GBP1P32455 592 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 SOX5P35711 763 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 P2RY2P41231 377 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 KLK7P49862 253 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 SGSHP51688 502 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 POLR2FP61218 127 aaKnown RBP7.81□□□□□ -1.16
LINC00640-201ENST00000554409 SLC6A3Q01959 620 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 SPEM2Q0P670 501 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 MTA1Q13330 715 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 BYSLQ13895 437 aaKnown RBP7.81□□□□□ -1.16
LINC00640-201ENST00000554409 SYCP1Q15431 976 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 TAF5Q15542 800 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 ELF2Q15723 593 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 CSRP2Q16527 193 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 ANO6Q4KMQ2 910 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 DCAF6Q58WW2 860 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 MS4A13Q5J8X5 152 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 PMS2CLQ68D20 193 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 TMEM215Q68D42 235 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 OR6B2Q6IFH4 312 aa7.81□□□□□ -1.16
LINC00640-201ENST00000554409 CAVIN1Q6NZI2 390 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms