RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CSRP3P50461 194 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 GALCP54803 685 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 UCNP55089 124 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 PCBP4P57723 403 aaKnown RBP9.5□□□□□ -0.89
PRKCH-208ENST00000553846 EHHADHQ08426 723 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 TAF1BQ53T94 588 aaPredicted RBP9.5□□□□□ -0.89
PRKCH-208ENST00000553846 C10orf120Q5SQS8 335 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 IGF2-ASQ6U949 168 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 BHLHA9Q7RTU4 235 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 WFDC5Q8TCV5 224 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 NOC3LQ8WTT2 800 aaKnown RBP9.5□□□□□ -0.89
PRKCH-208ENST00000553846 CYB5D2Q8WUJ1 264 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 FAM131CQ96AQ9 280 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 CCDC127Q96BQ5 260 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 ZNF578Q96N58 590 aaPredicted RBP9.5□□□□□ -0.89
PRKCH-208ENST00000553846 LGMNQ99538 433 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 MED10Q9BTT4 135 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 PABPC3Q9H361 631 aaKnown RBP9.5□□□□□ -0.89
PRKCH-208ENST00000553846 ERVMER34-1Q9H9K5 563 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 FAM49BQ9NUQ9 324 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 PANK4Q9NVE7 773 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 ADAMTS1Q9UHI8 967 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 R3HCC1Q9Y3T6 440 aaKnown RBP9.5□□□□□ -0.89
PRKCH-208ENST00000553846 DOCK9Q9BZ29 2069 aa9.5□□□□□ -0.89
PRKCH-208ENST00000553846 TEP1Q99973 2627 aaKnown RBP9.49□□□□□ -0.89
PRKCH-208ENST00000553846 TRIM38O00635 465 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 TERTO14746 1132 aaKnown RBP9.49□□□□□ -0.89
PRKCH-208ENST00000553846 LATO43561 262 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 C4BPAP04003 597 aaKnown RBP9.49□□□□□ -0.89
PRKCH-208ENST00000553846 ITGAVP06756 1048 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 FAM200BP0CF97 657 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 KRT10P13645 584 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 IDEP14735 1019 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 TNNI1P19237 187 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 CASP4P49662 377 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 NDST1P52848 882 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 C21orf59P57076 290 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 INCA1Q0VD86 236 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 BNIP3Q12983 259 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 ARID5BQ14865 1188 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 E2F5Q15329 346 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 TRIP4Q15650 581 aaPredicted RBP9.49□□□□□ -0.89
PRKCH-208ENST00000553846 ZNF699Q32M78 642 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 ARHGAP40Q5TG30 622 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 NCEH1Q6PIU2 408 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 SCARA5Q6ZMJ2 495 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 SV2BQ7L1I2 683 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 C12orf56Q8IXR9 622 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 RASSF8Q8NHQ8 419 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 ZNF507Q8TCN5 953 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 WFIKKN2Q8TEU8 576 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 CLIC6Q96NY7 704 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 MTG2Q9H4K7 406 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 GDF3Q9NR23 364 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 KIF3AQ9Y496 699 aa9.49□□□□□ -0.89
PRKCH-208ENST00000553846 MORC2Q9Y6X9 1032 aaPredicted RBP9.49□□□□□ -0.89
PRKCH-208ENST00000553846 LY6G6EA0A0G2JKS1 128 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 LRRIQ3A6PVS8 624 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-208ENST00000553846 K7ENP7 123 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 TULP1O00294 542 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-208ENST00000553846 SLC28A2O43868 658 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 MT-CO3P00414 261 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 DLDP09622 509 aaKnown RBP9.48□□□□□ -0.89
PRKCH-208ENST00000553846 GIMD1P0DJR0 217 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 ABCB4P21439 1286 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 CD38P28907 300 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 PSEN1P49768 467 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 CCR5P51681 352 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 SGSHP51688 502 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 ERVPABLB-1P60509 514 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 COG7P83436 770 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 VAC14Q08AM6 782 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 NCOA4Q13772 614 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 FNDC3BQ53EP0 1204 aaKnown RBP9.48□□□□□ -0.89
PRKCH-208ENST00000553846 RRAGBQ5VZM2 374 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 ZNF776Q68DI1 518 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-208ENST00000553846 CNNM4Q6P4Q7 775 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 INO80CQ6PI98 192 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-208ENST00000553846 ADAT2Q7Z6V5 191 aaKnown RBP9.48□□□□□ -0.89
PRKCH-208ENST00000553846 UNC93AQ86WB7 457 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 DENND1CQ8IV53 801 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 DHX40Q8IX18 779 aaKnown RBP9.48□□□□□ -0.89
PRKCH-208ENST00000553846 RDH13Q8NBN7 331 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 NAF1Q96HR8 494 aaKnown RBP9.48□□□□□ -0.89
PRKCH-208ENST00000553846 MRGPRX3Q96LB0 322 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 DCLK3Q9C098 648 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 NAGPAQ9UK23 515 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 SRPRBQ9Y5M8 271 aaKnown RBP9.48□□□□□ -0.89
PRKCH-208ENST00000553846 U3KQA8 63 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 NBASA2RRP1 2371 aa9.48□□□□□ -0.89
PRKCH-208ENST00000553846 TLR4O00206 839 aa9.47□□□□□ -0.89
PRKCH-208ENST00000553846 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
PRKCH-208ENST00000553846 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
PRKCH-208ENST00000553846 DNTTP04053 509 aa9.47□□□□□ -0.89
PRKCH-208ENST00000553846 MPOP05164 745 aa9.47□□□□□ -0.89
PRKCH-208ENST00000553846 GJB2P29033 226 aa9.47□□□□□ -0.89
PRKCH-208ENST00000553846 LSSP48449 732 aa9.47□□□□□ -0.89
PRKCH-208ENST00000553846 CYP2J2P51589 502 aa9.47□□□□□ -0.89
PRKCH-208ENST00000553846 EFEMP1Q12805 493 aa9.47□□□□□ -0.89
PRKCH-208ENST00000553846 TRPC3Q13507 836 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms