RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 KIAA1549LQ6ZVL6 1849 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 MYO1FO00160 1098 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 HOXC11O43248 304 aaPredicted RBP15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 MOCS2O96007 188 aaPredicted RBP15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 APOEP02649 317 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 IFNAR2P48551 515 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 VCPP55072 806 aaKnown RBP15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 MLLT6P55198 1093 aaPredicted RBP15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 NRG1Q02297 640 aaPredicted RBP15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 SEMA3BQ13214 749 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 RUNX3Q13761 415 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 PIGHQ14442 188 aaPredicted RBP15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 LY6G5CQ5SRR4 150 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 FYB2Q5VWT5 728 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 TXNRD3NBQ6F5E7 133 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 RFWD3Q6PCD5 774 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 ETFBKMTQ8IXQ9 262 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 YAF2Q8IY57 180 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 ZNF687Q8N1G0 1237 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 LRRC57Q8N9N7 239 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 ATP2A3Q93084 1043 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 C1orf74Q96LT6 269 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 HAPLN3Q96S86 360 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 IRX2Q9BZI1 471 aaPredicted RBP15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 WDCPQ9H6R7 721 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 LUC7LQ9NQ29 371 aaKnown RBP15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 SPHK2Q9NRA0 654 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 SNX10Q9Y5X0 201 aa15.38■□□□□ 0.05
MTHFD1-204ENST00000553405 FAM72CH0Y354 149 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 BUB1BO60566 1050 aaPredicted RBP15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 IPO7O95373 1038 aaKnown RBP15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 TACR2P21452 398 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 GJA4P35212 333 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 GGCXP38435 758 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 SOX9P48436 509 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 SLC11A2P49281 568 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 IRAK1P51617 712 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 TAS2R40P59535 323 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 ZXDAP98168 799 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 MESP2Q0VG99 397 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 AUHQ13825 339 aaKnown RBP15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 ITPRIPL2Q3MIP1 535 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 FAM72AQ5TYM5 149 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 RAP1GAP2Q684P5 730 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 NAIF1Q69YI7 327 aaPredicted RBP15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 FAM72DQ6L9T8 149 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 FBXL22Q6P050 247 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 FAM72BQ86X60 149 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 UBALD2Q8IYN6 164 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 PHTF2Q8N3S3 785 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 ATP6V0D2Q8N8Y2 350 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 TPCN2Q8NHX9 752 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 OSBPL2Q9H1P3 480 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 GOLPH3Q9H4A6 298 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 ZNF212Q9UDV6 495 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 FBXO10Q9UK96 956 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 FZD10Q9ULW2 581 aa15.37■□□□□ 0.05
MTHFD1-204ENST00000553405 DOCK4Q8N1I0 1966 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 IGLV3-10A0A075B6K4 115 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 KRBA1A5PL33 1030 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 TRDMT1O14717 391 aaKnown RBP15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 NFATC1O95644 943 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 CHRM1P11229 460 aaPredicted RBP15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 HOXD9P28356 352 aaPredicted RBP15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 CHKAP35790 457 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 OPRD1P41143 372 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 AIF1P55008 147 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 MTA1Q13330 715 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 CA9Q16790 459 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 C11orf63Q6NUN7 778 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 TXNDC11Q6PKC3 985 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 SND1Q7KZF4 910 aaKnown RBP eCLIP15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 SLFN11Q7Z7L1 901 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 C12orf40Q86WS4 652 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 CD101Q93033 1021 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 IGSF8Q969P0 613 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 LMLNQ96KR4 655 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 SNRNP25Q9BV90 132 aaKnown RBP15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 HEBP1Q9NRV9 189 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 WNT16Q9UBV4 365 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 LCMT1Q9UIC8 334 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 CLEC4EQ9ULY5 219 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 USP18Q9UMW8 372 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 PPP2R2CQ9Y2T4 447 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 PAXBP1Q9Y5B6 917 aa15.36■□□□□ 0.05
MTHFD1-204ENST00000553405 GRID2IPA4D2P6 1211 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 DRGXA6NNA5 263 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 CACNG3O60359 315 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 CCDC175P0C221 793 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 ADH5P11766 374 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 HOXC13P31276 330 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 CTHP32929 405 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 ARSEP51690 589 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 RPS24P62847 133 aaKnown RBP15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 PFKPQ01813 784 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 MESDQ14696 234 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 SLC44A4Q53GD3 710 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 MPP7Q5T2T1 576 aa15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 ASTLQ6HA08 431 aaPredicted RBP15.35■□□□□ 0.05
MTHFD1-204ENST00000553405 KIAA1328Q86T90 577 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms