RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 GRAP2O75791 330 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 CYP1A1P04798 512 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-204ENST00000553324 RETP07949 1114 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 FERP16591 822 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 NOMO3P69849 1222 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 ACBD5Q5T8D3 534 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-204ENST00000553324 NAA35Q5VZE5 725 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 ANO7Q6IWH7 933 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 TMEM92Q6UXU6 159 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 SND1Q7KZF4 910 aaKnown RBP eCLIP15.91■□□□□ 0.14
SHMT2-204ENST00000553324 HJURPQ8NCD3 748 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-204ENST00000553324 CPA5Q8WXQ8 436 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 P2RY11Q96G91 374 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 LOXL4Q96JB6 756 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 POLR3BQ9NW08 1133 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-204ENST00000553324 PLA2G4CQ9UP65 541 aa15.91■□□□□ 0.14
SHMT2-204ENST00000553324 PTPRZ1P23471 2315 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-204ENST00000553324 A0A1B0GTH6 734 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 GOLGA6L7A0A1B0GV03 622 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 TEX33O43247 280 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 MOCS2O96007 188 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-204ENST00000553324 HOXB2P14652 356 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 MMP8P22894 467 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 RNASE9P60153 205 aaKnown RBP15.9■□□□□ 0.14
SHMT2-204ENST00000553324 FMO1Q01740 532 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 NR1I3Q14994 352 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 GEN1Q17RS7 908 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 ZSCAN23Q3MJ62 389 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 MS4A13Q5J8X5 152 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 FAM102AQ5T9C2 384 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-204ENST00000553324 EGFLAMQ63HQ2 1017 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 RNF43Q68DV7 783 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 RFWD3Q6PCD5 774 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 XYLT1Q86Y38 959 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 AHI1Q8N157 1196 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 FIBINQ8TAL6 211 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 PGAP3Q96FM1 320 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-204ENST00000553324 ZC3H10Q96K80 434 aaKnown RBP15.9■□□□□ 0.14
SHMT2-204ENST00000553324 GABRG3Q99928 467 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 CBX8Q9HC52 389 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 BCCIPQ9P287 314 aaKnown RBP eCLIP15.9■□□□□ 0.14
SHMT2-204ENST00000553324 THAP10Q9P2Z0 257 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-204ENST00000553324 MYOFQ9NZM1 2061 aa15.9■□□□□ 0.14
SHMT2-204ENST00000553324 ANTXRLA6NF34 631 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 F5H5T6 163 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 M0QYT0 321 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 LRP3O75074 770 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 RHOBTB1O94844 696 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 ATP5BP06576 529 aaKnown RBP15.89■□□□□ 0.13
SHMT2-204ENST00000553324 CHRNB2P17787 502 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 HLA-FP30511 346 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 SLC6A4P31645 630 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 NSFP46459 744 aaKnown RBP15.89■□□□□ 0.13
SHMT2-204ENST00000553324 NME3Q13232 169 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 SRSF5Q13243 272 aaKnown RBP15.89■□□□□ 0.13
SHMT2-204ENST00000553324 STARD3Q14849 445 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 ELF2Q15723 593 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 SLC25A52Q3SY17 297 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 BRMS1LQ5PSV4 323 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 TTC39BQ5VTQ0 682 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-204ENST00000553324 NADSYN1Q6IA69 706 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 PPP1R2P3Q6NXS1 205 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-204ENST00000553324 KIAA0907Q7Z7F0 614 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-204ENST00000553324 MFN1Q8IWA4 741 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 PGBD3Q8N328 593 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.89■□□□□ 0.13
SHMT2-204ENST00000553324 MDGA1Q8NFP4 955 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 SLC20A1Q8WUM9 679 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 NT5C3BQ969T7 300 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 PPP1R9BQ96SB3 815 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 NPY6RQ99463 290 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 NUP58Q9BVL2 599 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 EDEM3Q9BZQ6 932 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 CIPCQ9C0C6 399 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 WDCPQ9H6R7 721 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 GGA2Q9UJY4 613 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 HCN2Q9UL51 889 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 CLEC4EQ9ULY5 219 aa15.89■□□□□ 0.13
SHMT2-204ENST00000553324 RIF1Q5UIP0 2472 aaKnown RBP15.88■□□□□ 0.13
SHMT2-204ENST00000553324 SYNJ2BP-COX16A0A087WUM0 186 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 A0A1W2PQF6 199 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 TCRBV21S2A2A0A5A6 115 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 SYNCRIPO60506 623 aaKnown RBP15.88■□□□□ 0.13
SHMT2-204ENST00000553324 FOXD2O60548 495 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-204ENST00000553324 PABPC1P11940 636 aaKnown RBP15.88■□□□□ 0.13
SHMT2-204ENST00000553324 UNGP13051 313 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-204ENST00000553324 HOXC13P31276 330 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 OXCT1P55809 520 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 ENPP2Q13822 863 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 RABGAP1LQ5R372 815 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 LUZP1Q86V48 1076 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 CHSY1Q86X52 802 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 SPACA7Q96KW9 195 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 NAP1L5Q96NT1 182 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-204ENST00000553324 ACOX2Q99424 681 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 AGPAT1Q99943 283 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 NUCKS1Q9H1E3 243 aaKnown RBP15.88■□□□□ 0.13
SHMT2-204ENST00000553324 ZDHHC4Q9NPG8 344 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 ABCB8Q9NUT2 735 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms