RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 CINPQ9BW66 212 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-217ENST00000553287 NAA15Q9BXJ9 866 aaKnown RBP5.52□□□□□ -1.53
ATXN3-217ENST00000553287 MAGEB5Q9BZ81 275 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 SPRTNQ9H040 489 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-217ENST00000553287 VPS16Q9H269 839 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 TUBA8Q9NY65 449 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-217ENST00000553287 MAFFQ9ULX9 164 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 PXDNQ92626 1479 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.51□□□□□ -1.53
ATXN3-217ENST00000553287 PLCH1Q4KWH8 1693 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 CLCA1A8K7I4 914 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 CCNT2O60583 730 aaKnown RBP5.51□□□□□ -1.53
ATXN3-217ENST00000553287 PRAMEF2O60811 474 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 TMIGD3P0DMS9 266 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-217ENST00000553287 TRIM27P14373 513 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 PTGER1P34995 402 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 PBX1P40424 430 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 CCDC15Q0P6D6 951 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 IFIT5Q13325 482 aaKnown RBP5.51□□□□□ -1.53
ATXN3-217ENST00000553287 SLC14A1Q13336 389 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 DNASE1L3Q13609 305 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 RABEP1Q15276 862 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 SEC23BQ15437 767 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 Q4G0T1 1027 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 FAXCQ5TGI0 409 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 PXDC1Q5TGL8 231 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 PJA1Q8NG27 643 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 ADGRE3Q9BY15 652 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 VPS45Q9NRW7 570 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 ELOVL5Q9NYP7 299 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 MYO1AQ9UBC5 1043 aa5.51□□□□□ -1.53
ATXN3-217ENST00000553287 RPRD2Q5VT52 1461 aaKnown RBP5.51□□□□□ -1.53
ATXN3-217ENST00000553287 VPS8Q8N3P4 1428 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 ANKRD50Q9ULJ7 1429 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 SLIT2O94813 1529 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 E5RJQ4 531 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 APOL1O14791 398 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 PMM2O15305 246 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 KCNQ3O43525 872 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 TSHRP16473 764 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 PFKFB3Q16875 520 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-217ENST00000553287 ABLIM2Q6H8Q1 611 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 NANOGP1Q8N7R0 232 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-217ENST00000553287 HIC2Q96JB3 615 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 ZC3H10Q96K80 434 aaKnown RBP5.5□□□□□ -1.53
ATXN3-217ENST00000553287 FCRL4Q96PJ5 515 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 TMEM79Q9BSE2 394 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 COLEC11Q9BWP8 271 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 SAP30LQ9HAJ7 183 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 PI4KBQ9UBF8 816 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 ZMYND8Q9ULU4 1186 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-217ENST00000553287 SPHKAPQ2M3C7 1700 aa5.5□□□□□ -1.53
ATXN3-217ENST00000553287 TNS1Q9HBL0 1735 aaKnown RBP5.5□□□□□ -1.53
ATXN3-217ENST00000553287 UTRNP46939 3433 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 NEXMIFQ5QGS0 1516 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 USP32Q8NFA0 1604 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 A0A1W2PPC4 97 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 ARP10275 920 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 MYL4P12829 197 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 GALNSP34059 522 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 DGKQP52824 942 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 KRTAP10-11P60412 298 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 GPS1Q13098 491 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 HLTFQ14527 1009 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATXN3-217ENST00000553287 ARL13BQ3SXY8 428 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 AASDHQ4L235 1098 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-217ENST00000553287 KSR2Q6VAB6 950 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 KIAA0408Q6ZU52 694 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATXN3-217ENST00000553287 CUL5Q93034 780 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 SNX27Q96L92 541 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 SIGLEC11Q96RL6 698 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 STARD7Q9NQZ5 370 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 GEMIN8Q9NWZ8 242 aaKnown RBP5.49□□□□□ -1.53
ATXN3-217ENST00000553287 TRNAU1APQ9NX07 287 aaKnown RBP5.49□□□□□ -1.53
ATXN3-217ENST00000553287 VPS4AQ9UN37 437 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 MAN2B2Q9Y2E5 1009 aa5.49□□□□□ -1.53
ATXN3-217ENST00000553287 RGPD8O14715 1765 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-217ENST00000553287 CLTCL1P53675 1640 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 RGPD1P0DJD0 1748 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 ZSCAN9O15535 394 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-217ENST00000553287 MBPP02686 304 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-217ENST00000553287 MYL3P08590 195 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 IDEP14735 1019 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 HOXD9P28356 352 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-217ENST00000553287 JAK3P52333 1124 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 KCNJ12Q14500 433 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 FAM110CQ1W6H9 321 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.48□□□□□ -1.53
ATXN3-217ENST00000553287 FAM209BQ5JX69 171 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 RAP1GAP2Q684P5 730 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 MRNIPQ6NTE8 343 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 HIBCHQ6NVY1 386 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-217ENST00000553287 USP17L6PQ6QN14 398 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 CCDC28AQ8IWP9 274 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 TXLNBQ8N3L3 684 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 PCDHAC1Q9H158 963 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 SEMA5BQ9P283 1151 aa5.48□□□□□ -1.53
ATXN3-217ENST00000553287 STK26Q9P289 416 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms