RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 DCAF6Q58WW2 860 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 MS4A13Q5J8X5 152 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 LAIR1Q6GTX8 287 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 OR6B2Q6IFH4 312 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 KIAA1211LQ6NV74 962 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 ADIPOR2Q86V24 386 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 DDI1Q8WTU0 396 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 PARD6AQ9NPB6 346 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 ANLNQ9NQW6 1124 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 MUC22E2RYF6 1773 aaPredicted RBP20.02■□□□□ 0.8
PTCH1-227ENST00000553256 SMTNL1A8MU46 457 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 CAPN9O14815 690 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 CYBBP04839 570 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 TPM2P07951 284 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 CDK11BP21127 795 aaKnown RBP20.01■□□□□ 0.79
PTCH1-227ENST00000553256 MMP8P22894 467 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 NOS2P35228 1153 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 STAT1P42224 750 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 MATKP42679 507 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 SLC11A2P49281 568 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 C2CD6Q53TS8 623 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 ANO7Q6IWH7 933 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 ARCQ7LC44 396 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 TRMT11Q7Z4G4 463 aaKnown RBP20.01■□□□□ 0.79
PTCH1-227ENST00000553256 ANKS1BQ7Z6G8 1248 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 KBTBD6Q86V97 674 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 FAM160A2Q8N612 972 aaPredicted RBP20.01■□□□□ 0.79
PTCH1-227ENST00000553256 ANKRD20A12PQ8NF67 263 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 C18orf8Q96DM3 657 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 PGAP3Q96FM1 320 aaPredicted RBP20.01■□□□□ 0.79
PTCH1-227ENST00000553256 TTYH3Q9C0H2 523 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 DUSP15Q9H1R2 295 aaPredicted RBP20.01■□□□□ 0.79
PTCH1-227ENST00000553256 ELOVL2Q9NXB9 296 aa20.01■□□□□ 0.79
PTCH1-227ENST00000553256 WASH3PC4AMC7 463 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 DCLK1O15075 740 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 RETP07949 1114 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 GABRG2P18507 467 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 IL12RB1P42701 662 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 RPS24P62847 133 aaKnown RBP20■□□□□ 0.79
PTCH1-227ENST00000553256 NR1I3Q14994 352 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 EIF4HQ15056 248 aaKnown RBP20■□□□□ 0.79
PTCH1-227ENST00000553256 LPAL2Q16609 132 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 PTPRNQ16849 979 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 MAP7D1Q3KQU3 841 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 PLK5Q496M5 336 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 NUDT18Q6ZVK8 323 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 IRF2BP2Q7Z5L9 587 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 NEK11Q8NG66 645 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 IPO4Q8TEX9 1081 aaKnown RBP20■□□□□ 0.79
PTCH1-227ENST00000553256 CPA5Q8WXQ8 436 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 BTN2A3PQ96KV6 586 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 CBX8Q9HC52 389 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20■□□□□ 0.79
PTCH1-227ENST00000553256 CEP83Q9Y592 693 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 SDK1Q7Z5N4 2213 aa20■□□□□ 0.79
PTCH1-227ENST00000553256 SPAG17Q6Q759 2223 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 CD70P32970 193 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 FLT3P36888 993 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 PBX1P40424 430 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 P2RY2P41231 377 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 GSCP56915 257 aaPredicted RBP19.99■□□□□ 0.79
PTCH1-227ENST00000553256 CDK17Q00537 523 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 C5orf22Q49AR2 442 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 NAA35Q5VZE5 725 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 CACNA2D4Q7Z3S7 1137 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 ERICH1Q86X53 443 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 FIBINQ8TAL6 211 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 TPSD1Q9BZJ3 242 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 CACNA2D2Q9NY47 1150 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 INTS6Q9UL03 887 aaKnown RBP19.99■□□□□ 0.79
PTCH1-227ENST00000553256 STON1Q9Y6Q2 735 aa19.99■□□□□ 0.79
PTCH1-227ENST00000553256 A0A1W2PQC6 194 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 TCRBV5S1A1TA0A578 114 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 NPC1O15118 1278 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 HOXB2P14652 356 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 WASP42768 502 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 CXCR3P49682 368 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 SNX16P57768 344 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 CENPCQ03188 943 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 FSCBQ5H9T9 825 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 E4F1Q66K89 784 aaPredicted RBP19.98■□□□□ 0.79
PTCH1-227ENST00000553256 PRR23BQ6ZRT6 265 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 ZNF683Q8IZ20 524 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 FRMD1Q8N878 549 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 SORCS1Q8WY21 1168 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 MYO19Q96H55 970 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 LOXL4Q96JB6 756 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 SPAG5Q96R06 1193 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 POLMQ9NP87 494 aaPredicted RBP19.98■□□□□ 0.79
PTCH1-227ENST00000553256 PIGVQ9NUD9 493 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 DDIT4Q9NX09 232 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 ARHGEF38Q9NXL2 777 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 MBD1Q9UIS9 605 aaPredicted RBP19.98■□□□□ 0.79
PTCH1-227ENST00000553256 MYO6Q9UM54 1294 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 RAD54BQ9Y620 910 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 PLXND1Q9Y4D7 1925 aa19.98■□□□□ 0.79
PTCH1-227ENST00000553256 ABCA7Q8IZY2 2146 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 TCRBV21S2A2A0A5A6 115 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 TIMM44O43615 452 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 TBL1XO60907 577 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms