RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 CAPSQ13938 189 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 SURF1Q15526 300 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 PPM1LQ5SGD2 360 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 PRAMEF18Q5VWM3 479 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 CYP2R1Q6VVX0 501 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 LPCAT2Q7L5N7 544 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 TMC7Q7Z402 723 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 CAND1Q86VP6 1230 aaKnown RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 PCDH20Q8N6Y1 951 aaKnown RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 ZNF781Q8N8C0 355 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 ITFG2Q969R8 447 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 PGLYRP2Q96PD5 576 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 CAB39LQ9H9S4 337 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 DDX43Q9NXZ2 648 aaKnown RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 HMGXB4Q9UGU5 601 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 CYTH4Q9UIA0 394 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 ITGA11Q9UKX5 1188 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 PSMD13Q9UNM6 376 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 TDRKHQ9Y2W6 561 aaKnown RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 ARHGEF37A1IGU5 675 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 TFE3P19532 575 aaPredicted RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 ADORA2AP29274 412 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 MSLNQ13421 630 aaPredicted RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 DCTN2Q13561 401 aaKnown RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 STRA8Q7Z7C7 330 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 COLGALT1Q8NBJ5 622 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 TMEM176AQ96HP8 235 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 PEBP4Q96S96 227 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 CCDC28BQ9BUN5 200 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 SNRNP25Q9BV90 132 aaKnown RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 GCOM2Q9BZD3 368 aaPredicted RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 ILKAPQ9H0C8 392 aaPredicted RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 PICK1Q9NRD5 415 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 PPP1R1BQ9UD71 204 aaPredicted RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 ARFGEF1Q9Y6D6 1849 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 H3BSA7 217 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 STX16-NPEPL1H3BU86 382 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 CRTAMO95727 393 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 STXBP2Q15833 593 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 CA9Q16790 459 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 LRRC8BQ6P9F7 803 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 PACS1Q6VY07 963 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 RNF135Q8IUD6 432 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 C12orf29Q8N999 325 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 CMASQ8NFW8 434 aaPredicted RBP11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 OR6B3Q8NGW1 331 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 AZIN2Q96A70 460 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 STRCP1A6NGW2 1772 aa11.9□□□□□ -0.51
PPFIA2-227ENST00000552948 BUD23O43709 281 aaKnown RBP11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 ADORA2BP29275 332 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 PHKA2P46019 1235 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 GK3PQ14409 553 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 HSF5Q4G112 596 aaPredicted RBP11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 SULF1Q8IWU6 871 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 DIS3LQ8TF46 1054 aaKnown RBP11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 LGMNQ99538 433 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 SIKE1Q9BRV8 207 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 HAUS8Q9BT25 410 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 ZNF180Q9UJW8 692 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 GOLGB1Q14789 3259 aaKnown RBP11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 ATP6V1G1O75348 118 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 ZNF143P52747 638 aaPredicted RBP11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 SLC9B1Q4ZJI4 515 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 ATF7IP2Q5U623 682 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 CES4AQ5XG92 561 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 LRRC8EQ6NSJ5 796 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 FBXL19Q6PCT2 694 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 FAM183BPQ6ZVS7 135 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 FAM131BQ86XD5 332 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 CATSPER1Q8NEC5 780 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 TFB1MQ8WVM0 346 aaKnown RBP11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 TRAPPC12Q8WVT3 735 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 FAM210AQ96ND0 272 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 TWNKQ96RR1 684 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 TMEM79Q9BSE2 394 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 OXCT2Q9BYC2 517 aaPredicted RBP11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 SDCBP2Q9H190 292 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 PTTG2Q9NZH5 202 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 TSPAN16Q9UKR8 245 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 AURKCQ9UQB9 309 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 A0A096LPK6 155 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 C3orf70A6NLC5 250 aaPredicted RBP11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 KCNK1O00180 336 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 GIPC1O14908 333 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 POLBP06746 335 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 XRCC1P18887 633 aaPredicted RBP11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 RXRBP28702 533 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 POU5F1BQ06416 359 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 DLG2Q15700 870 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 AMHR2Q16671 573 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 GOLGA7BQ2TAP0 167 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 ACOT1Q86TX2 421 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 KLHL23Q8NBE8 558 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 ACTRT2Q8TDY3 377 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 RNF19AQ9NV58 838 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 FZD1Q9UP38 647 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 PSAT1Q9Y617 370 aa11.89□□□□□ -0.51
PPFIA2-227ENST00000552948 ATXN1P54253 815 aaKnown RBP11.88□□□□□ -0.51
PPFIA2-227ENST00000552948 NAGLUP54802 743 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms