RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ASMTP46597 345 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 CAPZA2P47755 286 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 AMPHP49418 695 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 SELENOPP49908 381 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 HNMTP50135 292 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 ATP8B2P98198 1209 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 MYO1EQ12965 1108 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 SLC13A2Q13183 592 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 CAVIN4Q5BKX8 364 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 TMTC4Q5T4D3 741 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 ADALQ6DHV7 355 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 ANO7Q6IWH7 933 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 RAB11FIP2Q7L804 512 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 LIMS2Q7Z4I7 341 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 MON1AQ86VX9 555 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 PPP1R3BQ86XI6 285 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 RHOT1Q8IXI2 618 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 KBTBD2Q8IY47 623 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.44□□□□□ -1.7
USP44-208ENST00000552440 POGLUT1Q8NBL1 392 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 OR6J1Q8NGC5 347 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 KIAA1524Q8TCG1 905 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 FAM216AQ8WUB2 273 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 CFHR4Q92496 578 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 HOXB13Q92826 284 aaPredicted RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 RAB24Q969Q5 203 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 CFAP36Q96G28 342 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 PDLIM5Q96HC4 596 aaKnown RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 VPS50Q96JG6 964 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 FAM210AQ96ND0 272 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 TEX12Q9BXU0 123 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 REXO4Q9GZR2 422 aaKnown RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 CHST8Q9H2A9 424 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 SEC61A2Q9H9S3 476 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 A1CFQ9NQ94 594 aaKnown RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 SIRT3Q9NTG7 399 aaPredicted RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 TDP1Q9NUW8 608 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 DAPP1Q9UN19 280 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 ITM2BQ9Y287 266 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 TESMINQ9Y4I5 508 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 A0A0A6YYK5 440 aaPredicted RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 NPIPB15A6NHN6 443 aaPredicted RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 FAM171A2A8MVW0 826 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 E7EVH7 732 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 STX16-NPEPL1H3BU86 382 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 BTN3A1O00481 513 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 STX16O14662 325 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 HNRNPRO43390 633 aaKnown RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 KCNQ3O43525 872 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 TPOP07202 933 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 MYBL1P10243 752 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 FERP16591 822 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 TMEM11P17152 192 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 NT5C2P49902 561 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 HSD17B4P51659 736 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 INHBEP58166 350 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 CDC42EP1Q00587 391 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 GBE1Q04446 702 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 NOMO1Q15155 1222 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 MAN2A1Q16706 1144 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 TYSND1Q2T9J0 566 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 RABL6Q3YEC7 729 aaPredicted RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 ZNF628Q5EBL2 1059 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 MPP7Q5T2T1 576 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 KRT80Q6KB66 452 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 TEPPQ6URK8 271 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 KIAA0408Q6ZU52 694 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 CHST3Q7LGC8 479 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 PLPPR4Q7Z2D5 763 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 RABEPKQ7Z6M1 372 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 PROSER1Q86XN7 944 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 PEX5LQ8IYB4 626 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 HDDC3Q8N4P3 179 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 FRMD1Q8N878 549 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 GMCL1P1Q8NEA9 526 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 DNERQ8NFT8 737 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.44□□□□□ -1.7
USP44-208ENST00000552440 RSC1A1Q92681 617 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 C3orf49Q96BT1 292 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 HIST1H2AHQ96KK5 128 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 MRGPRX4Q96LA9 322 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 CCDC114Q96M63 670 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 ABHD1Q96SE0 405 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 HIST1H2AJQ99878 128 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 SOX7Q9BT81 388 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 HAPLN2Q9GZV7 340 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 SMARCAD1Q9H4L7 1026 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 WDCPQ9H6R7 721 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 DNAJC18Q9H819 358 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 ZBTB40Q9NUA8 1239 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 ZDHHC7Q9NXF8 308 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 GALNT8Q9NY28 637 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 NINJ2Q9NZG7 142 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 KCMF1Q9P0J7 381 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 SUCLA2Q9P2R7 463 aaPredicted RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 ST6GALNAC2Q9UJ37 374 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 CPSF3Q9UKF6 684 aaKnown RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 PIN4Q9Y237 131 aaKnown RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 POMT1Q9Y6A1 747 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 KDM3AQ9Y4C1 1321 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms