RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ZNF513Q8N8E2 541 aaPredicted RBP19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 ZNF557Q8N988 423 aaPredicted RBP19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 ATRIPQ8WXE1 791 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 ZSCAN32Q9NX65 697 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 STIM2Q9P246 746 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 TMEM59LQ9UK28 342 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 CAPN11Q9UMQ6 739 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 BZW2Q9Y6E2 419 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 WDFY4Q6ZS81 3184 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 TMCO5BA8MYB1 307 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 KCNU1A8MYU2 1149 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 F5H5T6 163 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 KLF8O95600 359 aaPredicted RBP19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 KRT3P12035 628 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 SKILP12757 684 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 SDC4P31431 198 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 GSCP56915 257 aaPredicted RBP19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 DMC1Q14565 340 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 MS4A13Q5J8X5 152 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 EOGTQ5NDL2 527 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 RAP1GAP2Q684P5 730 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 SPECC1LQ69YQ0 1117 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 MON1BQ7L1V2 547 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 SYT13Q7L8C5 426 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 LGI2Q8N0V4 545 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 ALLCQ8N6M5 410 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 EMC1Q8N766 993 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 C3orf20Q8ND61 904 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 KCNV2Q8TDN2 545 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 UCMAQ8WVF2 138 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 SYN2Q92777 582 aaPredicted RBP19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 TBCBQ99426 244 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 XPO7Q9UIA9 1087 aaKnown RBP19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 FBXO10Q9UK96 956 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 MMP17Q9ULZ9 603 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 SLC27A6Q9Y2P4 619 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 PCDHGA2Q9Y5H1 932 aa19.15■□□□□ 0.66
PRPF40B-216ENST00000552301 GFRA2O00451 464 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 GYPCP04921 128 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 CISD3P0C7P0 127 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 DESP17661 470 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 TACR2P21452 398 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 RDXP35241 583 aaKnown RBP19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 PTP4A2Q12974 167 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 EIF4EBP2Q13542 120 aaPredicted RBP19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 E2F5Q15329 346 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 BRMS1LQ5PSV4 323 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 RABGAP1LQ5R372 815 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 MPP7Q5T2T1 576 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 HEATR6Q6AI08 1181 aaKnown RBP19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 ZNF571Q7Z3V5 609 aaPredicted RBP19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 MFN1Q8IWA4 741 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 TXNDC5Q8NBS9 432 aaKnown RBP19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 PGAP3Q96FM1 320 aaPredicted RBP19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 CFAP57Q96MR6 1250 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 HHIPQ96QV1 700 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 SYT11Q9BT88 431 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 WDCPQ9H6R7 721 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 PIGVQ9NUD9 493 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 C2orf42Q9NWW7 574 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 R4GN57 208 aa19.14■□□□□ 0.65
PRPF40B-216ENST00000552301 MYO18AQ92614 2054 aaKnown RBP19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 K7ESF4 209 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 SERPING1P05155 500 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 PDGFRAP16234 1089 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 CASP14P31944 242 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 NBL1P41271 181 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 KIR2DL1P43626 348 aaPredicted RBP19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 SGSHP51688 502 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 RPS24P62847 133 aaKnown RBP19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 ATP11AP98196 1134 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 CDH18Q13634 790 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 CDO1Q16878 200 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 EMC10Q5UCC4 262 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 OTUD1Q5VV17 481 aaPredicted RBP19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 SDE2Q6IQ49 451 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 MCOLN2Q8IZK6 566 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 IL17RCQ8NAC3 791 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 TSTD1Q8NFU3 115 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 WFIKKN2Q8TEU8 576 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 RXFP2Q8WXD0 754 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 NT5C3BQ969T7 300 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 P2RY11Q96G91 374 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 PRICKLE1Q96MT3 831 aaPredicted RBP19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 CIPCQ9C0C6 399 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 CLEC4EQ9ULY5 219 aa19.13■□□□□ 0.65
PRPF40B-216ENST00000552301 PRRT4C9JH25 899 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 GJB6O95452 261 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 APBB3O95704 486 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 GZMAP12544 262 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 TDGF1P13385 188 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 TFE3P19532 575 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 GPD1P21695 349 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 CXCR3P49682 368 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 EIF4HQ15056 248 aaKnown RBP19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 GEN1Q17RS7 908 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 TSR1Q2NL82 804 aaKnown RBP19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 TTC39BQ5VTQ0 682 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 EGFLAMQ63HQ2 1017 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms