RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 EGFP01133 1207 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 SDC4P31431 198 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 FLT3P36888 993 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 TNFRSF4P43489 277 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 ATXN1P54253 815 aaKnown RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 ADKP55263 362 aaKnown RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 GSCP56915 257 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 PITX1P78337 314 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 CCINQ13939 588 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 PPP2R5DQ14738 602 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 GAB4Q2WGN9 574 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 MPP7Q5T2T1 576 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 FYB2Q5VWT5 728 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 DCUN1D2Q6PH85 259 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 MAMSTRQ6ZN01 415 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 MON1BQ7L1V2 547 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 TMC6Q7Z403 805 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 CNGA4Q8IV77 575 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 C1orf210Q8IVY1 113 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 CCDC117Q8IWD4 279 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 FAM217AQ8IXS0 508 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 C3orf20Q8ND61 904 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 RXFP2Q8WXD0 754 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 BHMTQ93088 406 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 PGAP3Q96FM1 320 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 MRFAP1L1Q96HT8 127 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 IER2Q9BTL4 223 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 SLC2A11Q9BYW1 496 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 RBM12Q9NTZ6 932 aaKnown RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 PARVAQ9NVD7 372 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 DNAJC17Q9NVM6 304 aaKnown RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 SPATA6Q9NWH7 488 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 TAS2R14Q9NYV8 317 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 PLK2Q9NYY3 685 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 LAMTOR5O43504 91 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 CACNG3O60359 315 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 KAT7O95251 611 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 PENKP01210 267 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-225ENST00000551845 MYBL1P10243 752 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 DESP17661 470 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 RRM1P23921 792 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 RFC1P35251 1148 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-225ENST00000551845 DGKGP49619 791 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 CXCR3P49682 368 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 ZNF75DP51815 510 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 ATP11AP98196 1134 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 ARL13BQ3SXY8 428 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 CCDC14Q49A88 953 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 BRMS1LQ5PSV4 323 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 CCDC122Q5T0U0 273 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 ACBD5Q5T8D3 534 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-225ENST00000551845 PIK3R6Q5UE93 754 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 NAIF1Q69YI7 327 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-225ENST00000551845 GRAMD4Q6IC98 578 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 DNAJC24Q6P3W2 148 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 ALKBH5Q6P6C2 394 aaKnown RBP11.01□□□□□ -0.65
PTCH1-225ENST00000551845 WDR59Q6PJI9 974 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 C12orf40Q86WS4 652 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 ETFBKMTQ8IXQ9 262 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 SPEM1Q8N4L4 309 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 EMC1Q8N766 993 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 ZNF557Q8N988 423 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-225ENST00000551845 TRIM11Q96F44 468 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 CFAP57Q96MR6 1250 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 TBCBQ99426 244 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 DNAJC7Q99615 494 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 TKTL2Q9H0I9 626 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 ISCUQ9H1K1 167 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 CHRDQ9H2X0 955 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 DEF6Q9H4E7 631 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 MRPL47Q9HD33 250 aaKnown RBP11.01□□□□□ -0.65
PTCH1-225ENST00000551845 ABHD10Q9NUJ1 306 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 ARHGAP20Q9P2F6 1191 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 FBXO10Q9UK96 956 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 CDV3Q9UKY7 258 aaKnown RBP11.01□□□□□ -0.65
PTCH1-225ENST00000551845 GREB1Q4ZG55 1949 aa11.01□□□□□ -0.65
PTCH1-225ENST00000551845 A0A087X0T9 212 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 SSU72P8A0A1W2PR75 194 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 C2CD4BA6NLJ0 364 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 K7EQS6 105 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 AKR1B10O60218 316 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 TBL1XO60907 577 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 ENDOD1O94919 500 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 PLEKP08567 350 aaPredicted RBP11□□□□□ -0.65
PTCH1-225ENST00000551845 CISD3P0C7P0 127 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 FAM228BP0C875 321 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 GPD1P21695 349 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 SLC6A4P31645 630 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 RDXP35241 583 aaKnown RBP11□□□□□ -0.65
PTCH1-225ENST00000551845 EIF4A3P38919 411 aaKnown RBP11□□□□□ -0.65
PTCH1-225ENST00000551845 PTPN9P43378 593 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 CXCL12P48061 93 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 MRPS21P82921 87 aaKnown RBP11□□□□□ -0.65
PTCH1-225ENST00000551845 MTAPQ13126 283 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 TBX2Q13207 712 aaPredicted RBP11□□□□□ -0.65
PTCH1-225ENST00000551845 MAMLD1Q13495 774 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 ARID5BQ14865 1188 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 FAM133BQ5BKY9 247 aaKnown RBP11□□□□□ -0.65
PTCH1-225ENST00000551845 MS4A13Q5J8X5 152 aa11□□□□□ -0.65
PTCH1-225ENST00000551845 NADSYN1Q6IA69 706 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms