RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 PIK3R6Q5UE93 754 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 SYPL2Q5VXT5 272 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 EGFLAMQ63HQ2 1017 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 PPP1R2P3Q6NXS1 205 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 NOP9Q86U38 636 aaKnown RBP13.82□□□□□ -0.2
CEP290-205ENST00000550962 CHSY1Q86X52 802 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 MFN1Q8IWA4 741 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 ADAM32Q8TC27 787 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 HMGB4Q8WW32 186 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 PPP1R9BQ96SB3 815 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 GABRG3Q99928 467 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 ELOVL2Q9NXB9 296 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.82□□□□□ -0.2
CEP290-205ENST00000550962 MYO6Q9UM54 1294 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 USP18Q9UMW8 372 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 PLA2G4CQ9UP65 541 aa13.82□□□□□ -0.2
CEP290-205ENST00000550962 SYNJ2BP-COX16A0A087WUM0 186 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 KCNU1A8MYU2 1149 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 PRRT4C9JH25 899 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 TRIM24O15164 1050 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 MAP3K13O43283 966 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 ZNF217O75362 1048 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 GRAP2O75791 330 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 IGLV3-25P01717 112 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 MMEP08473 750 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 FERP16591 822 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 DESP17661 470 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 NSFP46459 744 aaKnown RBP13.81□□□□□ -0.2
CEP290-205ENST00000550962 KLK7P49862 253 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 NOMO3P69849 1222 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 LMNB2Q03252 620 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 NME3Q13232 169 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 SRSF5Q13243 272 aaKnown RBP13.81□□□□□ -0.2
CEP290-205ENST00000550962 GEN1Q17RS7 908 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 FAM133BQ5BKY9 247 aaKnown RBP13.81□□□□□ -0.2
CEP290-205ENST00000550962 ZC3H12AQ5D1E8 599 aaKnown RBP13.81□□□□□ -0.2
CEP290-205ENST00000550962 NAA35Q5VZE5 725 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 TMEM92Q6UXU6 159 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 SFTPA1Q8IWL2 248 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 DHX40Q8IX18 779 aaKnown RBP13.81□□□□□ -0.2
CEP290-205ENST00000550962 FAM160A2Q8N612 972 aaPredicted RBP13.81□□□□□ -0.2
CEP290-205ENST00000550962 MDGA1Q8NFP4 955 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 DDX1Q92499 740 aaKnown RBP13.81□□□□□ -0.2
CEP290-205ENST00000550962 PIWIL1Q96J94 861 aaKnown RBP13.81□□□□□ -0.2
CEP290-205ENST00000550962 ZC3H10Q96K80 434 aaKnown RBP13.81□□□□□ -0.2
CEP290-205ENST00000550962 TPSD1Q9BZJ3 242 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 COX16Q9P0S2 106 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 GGA2Q9UJY4 613 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 PCDHGA5Q9Y5G8 931 aa13.81□□□□□ -0.2
CEP290-205ENST00000550962 PRR5-ARHGAP8B1AHC4 643 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 H0Y626 953 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 M0QYT0 321 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 ADAM23O75077 832 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 ASLP04424 464 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 PABPC1P11940 636 aaKnown RBP13.8□□□□□ -0.2
CEP290-205ENST00000550962 ATP1A3P13637 1013 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 POLR2EP19388 210 aaKnown RBP13.8□□□□□ -0.2
CEP290-205ENST00000550962 DPP6P42658 865 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 WASP42768 502 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 SULT1E1P49888 294 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 RNASE9P60153 205 aaKnown RBP13.8□□□□□ -0.2
CEP290-205ENST00000550962 ST8SIA6P61647 398 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 ARHGAP8P85298 464 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 TAF5Q15542 800 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 MS4A13Q5J8X5 152 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 BRMS1LQ5PSV4 323 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 RFWD3Q6PCD5 774 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 SERPINA13PQ6UXR4 307 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 SLC36A4Q6YBV0 504 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 CHST9Q7L1S5 443 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 ARCQ7LC44 396 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 KIAA2013Q8IYS2 634 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.8□□□□□ -0.2
CEP290-205ENST00000550962 FBRSQ9HAH7 460 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 RTN4Q9NQC3 1192 aaKnown RBP13.8□□□□□ -0.2
CEP290-205ENST00000550962 ABCB8Q9NUT2 735 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 SEPT11Q9NVA2 429 aaKnown RBP13.8□□□□□ -0.2
CEP290-205ENST00000550962 POLR3BQ9NW08 1133 aaPredicted RBP13.8□□□□□ -0.2
CEP290-205ENST00000550962 CACNA2D2Q9NY47 1150 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 STIM2Q9P246 746 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 THAP10Q9P2Z0 257 aaPredicted RBP13.8□□□□□ -0.2
CEP290-205ENST00000550962 NOCTQ9UK39 431 aaKnown RBP13.8□□□□□ -0.2
CEP290-205ENST00000550962 STON1Q9Y6Q2 735 aa13.8□□□□□ -0.2
CEP290-205ENST00000550962 MYOFQ9NZM1 2061 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 A0A1W2PQC6 194 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 ANKRD62A6NC57 917 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 EPN2O95208 641 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 CALB1P05937 261 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 TPM3P06753 285 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 TACR2P21452 398 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 HLA-FP30511 346 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 SLC6A4P31645 630 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 DEUP1Q05D60 604 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 SLC12A1Q13621 1099 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 SLC25A52Q3SY17 297 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 PLK5Q496M5 336 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 FNDC3BQ53EP0 1204 aaKnown RBP13.79□□□□□ -0.2
CEP290-205ENST00000550962 SPDYCQ5MJ68 293 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 RAP1GAP2Q684P5 730 aa13.79□□□□□ -0.2
CEP290-205ENST00000550962 LPCAT2Q7L5N7 544 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms