RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 CHFRQ96EP1 664 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 XPO6Q96QU8 1125 aaKnown RBP16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 PLK2Q9NYY3 685 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 SIT1Q9Y3P8 196 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 MTF2Q9Y483 593 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 TMEM191CA6NGB0 347 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 NCAM2O15394 837 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 CCP110O43303 1012 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 CYP1A2P05177 515 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 PSMA2P25787 234 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 SLC6A4P31645 630 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 SLC6A11P48066 632 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 OGDHQ02218 1023 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 GRSF1Q12849 480 aaKnown RBP eCLIP16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 RAB6CQ53S08 254 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 RAP1GAP2Q684P5 730 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 CWF19L1Q69YN2 538 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 STRADAQ7RTN6 431 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 BNIPLQ7Z465 357 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 C12orf40Q86WS4 652 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 CHSY1Q86X52 802 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 FAM131BQ86XD5 332 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 TMTC1Q8IUR5 882 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 SUGP1Q8IWZ8 645 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 FAM172AQ8WUF8 416 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 CTNNBL1Q8WYA6 563 aaPredicted RBP16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 CENPIQ92674 756 aaPredicted RBP16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 CNPY3Q9BT09 278 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 PACSIN1Q9BY11 444 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 TKTL2Q9H0I9 626 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 SIK2Q9H0K1 926 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 RAB6CQ9H0N0 254 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 FBRSL1Q9HCM7 1045 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 ARHGEF38Q9NXL2 777 aa16.82■□□□□ 0.28
CHMP1A-209ENST00000550872 WDFY4Q6ZS81 3184 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 PI15O43692 258 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 TULP3O75386 442 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 PAGE1O75459 146 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 PENKP01210 267 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 TACR2P21452 398 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 CYLC1P35663 651 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 CLCN5P51795 746 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 TMEM196Q5HYL7 178 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 MS4A13Q5J8X5 152 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 PIK3R6Q5UE93 754 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 FYB2Q5VWT5 728 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 ASTLQ6HA08 431 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 CCDC170Q8IYT3 715 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 LGI2Q8N0V4 545 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 PJA1Q8NG27 643 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 ARHGEF26Q96DR7 871 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 PNKPQ96T60 521 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 NUP85Q9BW27 656 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 OSBPL6Q9BZF3 934 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 IRX2Q9BZI1 471 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 DEC1Q9P2X7 70 aa16.81■□□□□ 0.28
CHMP1A-209ENST00000550872 TYW5A2RUC4 315 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 F5H5T6 163 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 GFRA2O00451 464 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 CACNG3O60359 315 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 DCNP07585 359 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 AOC1P19801 751 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 FECHP22830 423 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 EIF2DP41214 584 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 HDAC4P56524 1084 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 GSDMDP57764 484 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 KDSRQ06136 332 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 ARL13BQ3SXY8 428 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 FSTL4Q6MZW2 842 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 SCYL2Q6P3W7 929 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 ETFBKMTQ8IXQ9 262 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 CCDC105Q8IYK2 499 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 P2RY11Q96G91 374 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 BAG1Q99933 345 aaPredicted RBP16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 TRIM7Q9C029 511 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 LMAN1LQ9HAT1 526 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 ANLNQ9NQW6 1124 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 TMPRSS4Q9NRS4 437 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 DNAJC17Q9NVM6 304 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 STIM2Q9P246 746 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 CTTNBP2NLQ9P2B4 639 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 HS3ST4Q9Y661 456 aa16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 EPN1Q9Y6I3 576 aaPredicted RBP16.8■□□□□ 0.28
CHMP1A-209ENST00000550872 SOWAHDA6NJG2 315 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 TBL1XO60907 577 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 RNF8O76064 485 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 APODP05090 189 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 TMEM253P0C7T8 217 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 CHRNB1P11230 501 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 DRD1P21728 446 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 ADRA1BP35368 520 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 GGCXP38435 758 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 MAGEA1P43355 309 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 MRE11P49959 708 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 SGSHP51688 502 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 RPS24P62847 133 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 LRRC32Q14392 662 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 SPA17Q15506 151 aa16.79■□□□□ 0.28
CHMP1A-209ENST00000550872 PREPLQ4J6C6 727 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms