RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 INTS8Q75QN2 995 aaKnown RBP10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 GRAMD1CQ8IYS0 662 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 ANKRD52Q8NB46 1076 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 WFIKKN2Q8TEU8 576 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 PLD4Q96BZ4 506 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 BIRC7Q96CA5 298 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 TMEM176AQ96HP8 235 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 IRX2Q9BZI1 471 aaPredicted RBP10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 C6orf106Q9H6K1 298 aaPredicted RBP10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 TM9SF3Q9HD45 589 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 EXOC1Q9NV70 894 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 USP25Q9UHP3 1055 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 RCOR1Q9UKL0 485 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 BTBD3Q9Y2F9 522 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 SLCO1B1Q9Y6L6 691 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 APC2O95996 2303 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 SHROOM3Q8TF72 1996 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 K7ELQ4 463 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 SEMA4FO95754 770 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 LATS1O95835 1130 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 ZBED1O96006 694 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 CD58P19256 250 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 HOXD9P28356 352 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 HLA-FP30511 346 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 ME1P48163 572 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 GCLMP48507 274 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 HARS2P49590 506 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 RAD23BP54727 409 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 RPS14P62263 151 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 MPP7Q5T2T1 576 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 ADGRF1Q5T601 910 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 RSRC2Q7L4I2 434 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 BHLHA9Q7RTU4 235 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 ADIPOR2Q86V24 386 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 FAM124AQ86V42 546 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 PIGZQ86VD9 579 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 TMPRSS12Q86WS5 348 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 CCDC150Q8NCX0 1101 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 ENGASEQ8NFI3 743 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 TMA16Q96EY4 203 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 LRIG1Q96JA1 1093 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 BBC3Q96PG8 261 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 ORAI3Q9BRQ5 295 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 BTBD1Q9H0C5 482 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 LHX5Q9H2C1 402 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 SGK2Q9HBY8 427 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 TMEM8AQ9HCN3 771 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 PRSS16Q9NQE7 514 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 OLA1Q9NTK5 396 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 SUN2Q9UH99 717 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 CFAP45Q9UL16 551 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 HBS1LQ9Y450 684 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 CELSR3Q9NYQ7 3312 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 LOC400499M0QZD8 3231 aa10.29□□□□□ -0.76
TRAFD1-207ENST00000550051 ASXL3Q9C0F0 2248 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 KCNK3O14649 394 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 VILLO15195 856 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 ATP5BP06576 529 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 DLDP09622 509 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 CDK4P11802 303 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 KRT13P13646 458 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 HLA-EP13747 358 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 RPL13P26373 211 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 PSMC2P35998 433 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 CTSKP43235 329 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 TKTL1P51854 596 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 SLC8A3P57103 927 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 ZNF394Q53GI3 561 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 SLC4A11Q8NBS3 891 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 GOLGA1Q92805 767 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 ARID3AQ99856 593 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 CISHQ9NSE2 258 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 SCML1Q9UN30 329 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 PCDHGA1Q9Y5H4 931 aa10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 COL5A1P20908 1838 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-207ENST00000550051 C10orf142B7Z368 130 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 H0Y8X5 98 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 RHOBTB3O94955 611 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 DNTTP04053 509 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 C1SP09871 688 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 TRIM49P0CI25 452 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 TRIM49CP0CI26 452 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 ZSCAN22P10073 491 aaPredicted RBP10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 CMA1P23946 247 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 NR2F2P24468 414 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 CCT8P50990 548 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 BCAT1P54687 386 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 RACK1P63244 317 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 ADAM9Q13443 819 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 ARID5BQ14865 1188 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 FNDC3BQ53EP0 1204 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 KCNT1Q5JUK3 1230 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 BSPRYQ5W0U4 402 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 KRT39Q6A163 491 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 USP30Q70CQ3 517 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 CHST9Q7L1S5 443 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 MARCH9Q86YJ5 346 aa10.27□□□□□ -0.77
TRAFD1-207ENST00000550051 FMNL3Q8IVF7 1028 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms