RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 LMO3Q8TAP4 145 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 ATXN2LQ8WWM7 1075 aaKnown RBP15.39■□□□□ 0.05
CUX1-214ENST00000550008 APOPT1Q96IL0 206 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 GPR63Q9BZJ6 419 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 ILKAPQ9H0C8 392 aaPredicted RBP15.39■□□□□ 0.05
CUX1-214ENST00000550008 CDY1Q9Y6F8 540 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 CRYBG1Q9Y4K1 1723 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 A0A096LPK6 155 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 EEF1B2P24534 225 aaKnown RBP15.39■□□□□ 0.05
CUX1-214ENST00000550008 PPARGP37231 505 aaPredicted RBP15.39■□□□□ 0.05
CUX1-214ENST00000550008 ALDH1A3P47895 512 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 NUDT2P50583 147 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 GEMP55040 296 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 C6orf10Q5SRN2 563 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 ZDHHC24Q6UX98 284 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 ILDR2Q71H61 639 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 GANCQ8TET4 914 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 NCLNQ969V3 563 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 HSFY1Q96LI6 401 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 FBXL18Q96ME1 805 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 FAM105AQ9NUU6 356 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 MYH11P35749 1972 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 RNF103-CHMP3A0A140T963 221 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 FCHO1O14526 889 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 PSMD3O43242 534 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 RHOBTB1O94844 696 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 STMN1P16949 149 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 KCNJ2P63252 427 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 NFE2Q16621 373 aaPredicted RBP15.39■□□□□ 0.05
CUX1-214ENST00000550008 LCLAT1Q6UWP7 414 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 TAS1R3Q7RTX0 852 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 RNF148Q8N7C7 305 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 ICA1LQ8NDH6 482 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 MIPOL1Q8TD10 442 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 COLEC11Q9BWP8 271 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 FZD8Q9H461 694 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 PTPRHQ9HD43 1115 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 SLC17A7Q9P2U7 560 aa15.39■□□□□ 0.05
CUX1-214ENST00000550008 AAR2Q9Y312 384 aaKnown RBP15.39■□□□□ 0.05
CUX1-214ENST00000550008 ALDH2P05091 517 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 CKMP06732 381 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 NDUFV1P49821 464 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 CCL14Q16627 93 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 ZNF470Q6ECI4 717 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 APOL5Q9BWW9 433 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 SFMBT1Q9UHJ3 866 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 V9GYQ6 96 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 ITGB4P16144 1822 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 MYH7P12883 1935 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 MYO5AQ9Y4I1 1855 aaKnown RBP15.38■□□□□ 0.05
CUX1-214ENST00000550008 A0A0A0MRY4 1105 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 TBKBP1A7MCY6 615 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 H0Y626 953 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 TM9SF1O15321 606 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 PAPSS1O43252 624 aaPredicted RBP15.38■□□□□ 0.05
CUX1-214ENST00000550008 GP5P40197 560 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 MMP13P45452 471 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 MRPS6P82932 125 aaKnown RBP15.38■□□□□ 0.05
CUX1-214ENST00000550008 MARC1Q5VT66 337 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 KCNMB4Q86W47 210 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 CPT1BQ92523 772 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 SPATA13Q96N96 652 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 PIDD1Q9HB75 910 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 ACSS2Q9NR19 701 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 ACOT9Q9Y305 439 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 FAM237BA0A1B0GVD1 139 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 MEI4A8MW99 385 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 F5H5T6 163 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 BIRC2Q13490 618 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 MYLPFQ96A32 169 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 LHX5Q9H2C1 402 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 CXorf56Q9H5V9 222 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 SLC27A5Q9Y2P5 690 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 ALOX15BO15296 676 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 STX7O15400 261 aaKnown RBP15.38■□□□□ 0.05
CUX1-214ENST00000550008 TPST1O60507 370 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 ANP32DO95626 131 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 HSPA8P11142 646 aaKnown RBP15.38■□□□□ 0.05
CUX1-214ENST00000550008 NFKB1P19838 968 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 TBX4P57082 545 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 FAM110CQ1W6H9 321 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 FNBP1LQ5T0N5 605 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 ELMOD1Q8N336 334 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 TEX9Q8N6V9 391 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 CINPQ9BW66 212 aaPredicted RBP15.38■□□□□ 0.05
CUX1-214ENST00000550008 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
CUX1-214ENST00000550008 TIMM44O43615 452 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 PIRTP0C851 137 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 CCND1P24385 295 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 IL1R2P27930 398 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 NR2C2P49116 596 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 SERPINB8P50452 374 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 MAXP61244 160 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 FAM83EQ2M2I3 478 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 C1orf220Q5T0J3 134 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 ZNF280DQ6N043 979 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 TRABD2AQ86V40 505 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 TTC30BQ8N4P2 665 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 PLD5Q8N7P1 536 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 SOCS4Q8WXH5 440 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms