RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 CDY1Q9Y6F8 540 aa23.78■■□□□ 1.4
NPAS3-206ENST00000548645 C2CD4BA6NLJ0 364 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 ALDH1A2O94788 518 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 ATP6V1B1P15313 513 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 RAB6CQ53S08 254 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 ZFP1Q6P2D0 407 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 ANKRD36BP1Q96IX9 119 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 RAB6CQ9H0N0 254 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 THEGQ9P2T0 379 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 M0QYV0 167 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 GCATO75600 419 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 PTPN11Q06124 597 aaPredicted RBP23.77■■□□□ 1.4
NPAS3-206ENST00000548645 ORC1Q13415 861 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 MYLK3Q32MK0 819 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 ZNF667Q5HYK9 610 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 METTL21CQ5VZV1 264 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 ADCY4Q8NFM4 1077 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 PCDH19Q8TAB3 1148 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 MAML3Q96JK9 1138 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 CNBD2Q96M20 576 aa23.77■■□□□ 1.4
NPAS3-206ENST00000548645 CPSF3Q9UKF6 684 aaKnown RBP23.77■■□□□ 1.4
NPAS3-206ENST00000548645 HOXC6P09630 235 aa23.77■■□□□ 1.39
NPAS3-206ENST00000548645 CCDC130P13994 396 aa23.77■■□□□ 1.39
NPAS3-206ENST00000548645 MX2P20592 715 aa23.77■■□□□ 1.39
NPAS3-206ENST00000548645 ARRB2P32121 409 aa23.77■■□□□ 1.39
NPAS3-206ENST00000548645 DGKZQ13574 1117 aa23.77■■□□□ 1.39
NPAS3-206ENST00000548645 ADGRE1Q14246 886 aa23.77■■□□□ 1.39
NPAS3-206ENST00000548645 FKBP1CQ5VVH2 108 aa23.77■■□□□ 1.39
NPAS3-206ENST00000548645 STEAP4Q687X5 459 aa23.77■■□□□ 1.39
NPAS3-206ENST00000548645 TTLL6Q8N841 843 aa23.77■■□□□ 1.39
NPAS3-206ENST00000548645 DOCK5Q9H7D0 1870 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 BRWD3Q6RI45 1802 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 ZBTB14O43829 449 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 APBA3O96018 575 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 SCNN1BP51168 640 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 CDH8P55286 799 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 PRKG1Q13976 671 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 SCYL2Q6P3W7 929 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 BORAQ6PGQ7 559 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 COG4Q9H9E3 785 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 PCDH18Q9HCL0 1135 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 RIPK3Q9Y572 518 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 HSPA13P48723 471 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 EFNA5P52803 228 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 MYBPC1Q00872 1141 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 NIPAL4Q0D2K0 466 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 CASC4Q6P4E1 433 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 EPGNQ6UW88 154 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 C16orf89Q6UX73 402 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 UNC5BQ8IZJ1 945 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 BCO2Q9BYV7 579 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 GPATCH2LQ9NWQ4 482 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 BTBD7Q9P203 1132 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 APPL1Q9UKG1 709 aa23.76■■□□□ 1.39
NPAS3-206ENST00000548645 SPATA31C2B4DYI2 1134 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 E9PBE3 544 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 KLHL41O60662 606 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 FAM58BPP0C7Q3 252 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 DESP17661 470 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 ADORA2AP29274 412 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 GRIA1P42261 906 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 GPD2P43304 727 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 ADRM1Q16186 407 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 LRRN4Q8WUT4 740 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 PPP1R1BQ9UD71 204 aaPredicted RBP23.75■■□□□ 1.39
NPAS3-206ENST00000548645 PCDHB12Q9Y5F1 795 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 MSCO60682 206 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 KRT19P08727 400 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 THRAP10827 490 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 CDK4P11802 303 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 NAB1Q13506 487 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 TRNP1Q6NT89 227 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 PRPF18Q99633 342 aaKnown RBP23.75■■□□□ 1.39
NPAS3-206ENST00000548645 NIFKQ9BYG3 293 aaKnown RBP23.75■■□□□ 1.39
NPAS3-206ENST00000548645 SENP6Q9GZR1 1112 aaPredicted RBP23.75■■□□□ 1.39
NPAS3-206ENST00000548645 TMEM216Q9P0N5 145 aa23.75■■□□□ 1.39
NPAS3-206ENST00000548645 hCG_2014768A0A024R1R8 64 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 WDR27A2RRH5 827 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 PRKCGP05129 697 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 CPA3P15088 417 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 NR1H2P55055 460 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 FLOT2Q14254 428 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 USP41Q3LFD5 358 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 OR6B2Q6IFH4 312 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 RSBN1LQ6PCB5 846 aaPredicted RBP23.74■■□□□ 1.39
NPAS3-206ENST00000548645 IYDQ6PHW0 289 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 FAM83AQ86UY5 434 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 LENG8Q96PV6 779 aaPredicted RBP23.74■■□□□ 1.39
NPAS3-206ENST00000548645 CDH19Q9H159 772 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 SLC17A6Q9P2U8 582 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 A0A0J9YVX5 310 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 VWA5AO00534 786 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 ISLR2Q6UXK2 745 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 ACO2Q99798 780 aaKnown RBP23.74■■□□□ 1.39
NPAS3-206ENST00000548645 MRPL1Q9BYD6 325 aaKnown RBP23.74■■□□□ 1.39
NPAS3-206ENST00000548645 RHBDL2Q9NX52 303 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 PCDHGB4Q9UN71 923 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 GNEQ9Y223 722 aaKnown RBP23.74■■□□□ 1.39
NPAS3-206ENST00000548645 PCDHGB5Q9Y5G0 923 aa23.74■■□□□ 1.39
NPAS3-206ENST00000548645 AIM2O14862 343 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms