RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ZNF84P51523 738 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 GAB1Q13480 694 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 ZNF268Q14587 947 aaPredicted RBP4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 TUBB8Q3ZCM7 444 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 TMEM88Q6PEY1 159 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 NEK8Q86SG6 692 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 SPATA5Q8NB90 893 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 ADPRHL1Q8NDY3 354 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 OR1N1Q8NGS0 311 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 TRAPPC12Q8WVT3 735 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 MAP4K1Q92918 833 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 MCRS1Q96EZ8 462 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 DDX23Q9BUQ8 820 aaKnown RBP4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 ELOVL1Q9BW60 279 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 TRIM2Q9C040 744 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 ERVK-5Q9HDB9 667 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 LIN7CQ9NUP9 197 aaKnown RBP4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 ASNSD1Q9NWL6 643 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 C19orf53Q9UNZ5 99 aaPredicted RBP4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 MBD3L5A6NJ08 208 aaPredicted RBP4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 C16orf96A6NNT2 1141 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 KIF28PB7ZC32 967 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 INO80B-WBP1J3KQ70 363 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 CD63P08962 238 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 GYS1P13807 737 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 IGFBP2P18065 325 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 KELP23276 732 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 EPHB2P29323 1055 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 MPGP29372 298 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 PNLIPRP1P54315 467 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 RPL15P61313 204 aaKnown RBP4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 SF3A3Q12874 501 aaKnown RBP eCLIP4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 KPNB1Q14974 876 aaKnown RBP4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 DAZAP2Q15038 168 aaPredicted RBP4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 BTBD16Q32M84 506 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 ANKRD40Q6AI12 368 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 LIN54Q6MZP7 749 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 SLC18B1Q6NT16 456 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 ERAP2Q6P179 960 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 SLC39A5Q6ZMH5 540 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 UEVLDQ8IX04 471 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 HMGB4Q8WW32 186 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 CPT1BQ92523 772 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 CCT6BQ92526 530 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 CELF1Q92879 486 aaKnown RBP4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 TRMT61AQ96FX7 289 aaKnown RBP4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 HERPUD2Q9BSE4 406 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 GATA5Q9BWX5 397 aaPredicted RBP4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 TMEM120AQ9BXJ8 343 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 BRD8Q9H0E9 1235 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 VPS16Q9H269 839 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 PTPRHQ9HD43 1115 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 NRIP3Q9NQ35 241 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 NDUFAF4Q9P032 175 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 PI4KBQ9UBF8 816 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 GRHPRQ9UBQ7 328 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 DAPP1Q9UN19 280 aa4.72□□□□□ -1.65
DEPDC4-205ENST00000548313 CYP3A7-CYP3A51PA0A087WV96 503 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3DA0A087WVF3 549 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3IA0A087WXS9 549 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3EA0A087X179 549 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3KA0A087X1G2 549 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3BA6NDS4 549 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3FA6NER0 549 aaPredicted RBP4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 SLC38A8A6NNN8 435 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3LB9A6J9 549 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 M0QYT0 321 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 PPP6R2O75170 966 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 ALDOAP04075 364 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3HP0C7X1 549 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 PRR35P0CG20 571 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 ITGB6P18564 788 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 CYP3A7P24462 503 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 CST5P28325 142 aaPredicted RBP4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 GRK5P34947 590 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 STAT6P42226 847 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 FOXL2P58012 376 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 GHRHRQ02643 423 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 DMWDQ09019 674 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 SEC23BQ15437 767 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 EZH2Q15910 746 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 SRSF7Q16629 238 aaKnown RBP eCLIP4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TTC22Q5TAA0 569 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3GQ6DHY5 549 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 SULT6B1Q6IMI4 303 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3CQ6IPX1 549 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 BHLHA9Q7RTU4 235 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 YTHDF3Q7Z739 585 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 TBC1D3Q8IZP1 549 aaPredicted RBP4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 GALNT15Q8N3T1 639 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 NKAPQ8N5F7 415 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 MYCT1Q8N699 235 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 SCAMP5Q8TAC9 235 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 DDB2Q92466 427 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 FCRL5Q96RD9 977 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 QTRT1Q9BXR0 403 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 MYLK2Q9H1R3 596 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 SFXN1Q9H9B4 322 aa4.71□□□□□ -1.66
DEPDC4-205ENST00000548313 MLXIPQ9HAP2 919 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms